RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 KBTBD8Q8NFY9 601 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 LILRB1Q8NHL6 650 aaPredicted RBP17.13■□□□□ 0.33
LIME1-205ENST00000480139 KCNS3Q9BQ31 491 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 HCAR1Q9BXC0 346 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 OR2H1Q9GZK4 316 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 HEATR1Q9H583 2144 aaKnown RBP17.13■□□□□ 0.33
LIME1-205ENST00000480139 HINT3Q9NQE9 182 aaKnown RBP17.13■□□□□ 0.33
LIME1-205ENST00000480139 CACNA1DQ01668 2161 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 IGHV2OR16-5A0A0B4J2B6 119 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 IQCMA0A1B0GVH7 501 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 FAM183AA6NL82 134 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 E9PQ18 207 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 HS3ST1O14792 307 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 CASQ2O14958 399 aaPredicted RBP17.12■□□□□ 0.33
LIME1-205ENST00000480139 GPANK1O95872 356 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 POLR2IP36954 125 aaKnown RBP17.12■□□□□ 0.33
LIME1-205ENST00000480139 EFNB1P98172 346 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 PSG4Q00888 419 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 TEKQ02763 1124 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 TRIP10Q15642 601 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 PLBD1Q6P4A8 553 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 ALDH16A1Q8IZ83 802 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 PACRGLQ8N7B6 248 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 OR10H5Q8NGA6 315 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 ZNRF4Q8WWF5 429 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 MS4A3Q96HJ5 214 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 RDH12Q96NR8 316 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 GRIP2Q9C0E4 1043 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 MRPL22Q9NWU5 206 aaKnown RBP17.12■□□□□ 0.33
LIME1-205ENST00000480139 ASH2LQ9UBL3 628 aa17.12■□□□□ 0.33
LIME1-205ENST00000480139 FAM171A2A8MVW0 826 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 ATP6V1G2-DDX39BF2Z307 99 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 GLCEO94923 617 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 SNAP29O95721 258 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 HLA-DQA2P01906 255 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 GYPBP06028 91 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 COX5BP10606 129 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 CLUP10909 449 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 ZNF35P13682 527 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 CALCRP30988 508 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 FMO3P31513 532 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 CDH11P55287 796 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 HIST1H3AP68431 136 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 DBPQ10586 325 aaPredicted RBP17.11■□□□□ 0.33
LIME1-205ENST00000480139 MEP1BQ16820 701 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 SLC35D3Q5M8T2 416 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 HIST2H3PS2Q5TEC6 136 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 LINC01590Q5TEZ4 76 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 C20orf204Q6ZNR8 217 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 HIST2H3AQ71DI3 136 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
LIME1-205ENST00000480139 CXXC5Q7LFL8 322 aaKnown RBP17.11■□□□□ 0.33
LIME1-205ENST00000480139 CPOQ8IVL8 374 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 ZNF611Q8N823 705 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 SLC30A7Q8NEW0 376 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 OR4F15Q8NGB8 312 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 OR1J2Q8NGS2 313 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 AKAP1Q92667 903 aaKnown RBP eCLIP17.11■□□□□ 0.33
LIME1-205ENST00000480139 FBXW5Q969U6 566 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 HRASLS5Q96KN8 279 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 WNT5BQ9H1J7 359 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 MED20Q9H944 212 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 ATPIF1Q9UII2 106 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 EDARQ9UNE0 448 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 LHFPL6Q9Y693 200 aa17.11■□□□□ 0.33
LIME1-205ENST00000480139 H0YHG0 523 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 PRKYO43930 277 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 ZNF823P16415 610 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 SLC2A5P22732 501 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 GGT2P36268 569 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 PCK2Q16822 640 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 TBC1D28Q2M2D7 210 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 TEX30Q5JUR7 227 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 PAMR1Q6UXH9 720 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 CPEB3Q8NE35 698 aaKnown RBP17.1■□□□□ 0.33
LIME1-205ENST00000480139 NUP37Q8NFH4 326 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 GJC3Q8NFK1 279 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 OR51L1Q8NGJ5 315 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 OR6K6Q8NGW6 343 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 TMEM163Q8TC26 289 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 MBOAT4Q96T53 435 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 TOR3AQ9H497 397 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 MARCH7Q9H992 704 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 CYB5R1Q9UHQ9 305 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 POLR1DQ9Y2S0 133 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 COMMD3-BMI1R4GMX3 469 aa17.1■□□□□ 0.33
LIME1-205ENST00000480139 PLCE1Q9P212 2302 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 SGCEO43556 437 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 STOMP27105 288 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 PEX2P28328 305 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 APLNRP35414 380 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 CDC42P60953 191 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 ADAM8P78325 824 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 OGFRL1Q5TC84 451 aaPredicted RBP17.09■□□□□ 0.33
LIME1-205ENST00000480139 SLC18B1Q6NT16 456 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 AKR7LQ8NHP1 331 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 OTULINQ96BN8 352 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 UBTD1Q9HAC8 227 aa17.09■□□□□ 0.33
LIME1-205ENST00000480139 CISD1Q9NZ45 108 aaKnown RBP17.09■□□□□ 0.33
LIME1-205ENST00000480139 POU2F3Q9UKI9 436 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms