RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FABP3P05413 133 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ADH4P08319 380 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CST2P09228 141 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 HLA-DOBP13765 273 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ACADSP16219 412 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF14P17017 642 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CCNA2P20248 432 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 GSTM3P21266 225 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 AHCYP23526 432 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CPT2P23786 658 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CRABP1P29762 137 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 GLRXP35754 106 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RPS19P39019 145 aaKnown RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 OR1E2P47887 323 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 GSSP48637 474 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 PPOXP50336 477 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF84P51523 738 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ART1P52961 327 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BLVRAP53004 296 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 LSM6P62312 80 aaKnown RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ARF1P84077 181 aaKnown RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 VLDLRP98155 873 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NAAAQ02083 359 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CHRNB3Q05901 458 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BNIP1Q12981 228 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 TSPAN31Q12999 210 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 MOGQ16653 247 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 GSG1Q2KHT4 349 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CEACAM16Q2WEN9 425 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RFX4Q33E94 735 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 SLC36A2Q495M3 483 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 FAM98BQ52LJ0 330 aaKnown RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF770Q6IQ21 691 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NIPAL3Q6P499 406 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 SLC25A47Q6Q0C1 308 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 LINGO2Q7L985 606 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 VTCN1Q7Z7D3 282 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BIVMQ86UB2 503 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 DHFR2Q86XF0 187 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 DEFB107AQ8IZN7 70 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 MUC15Q8N387 334 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 SLC22A24Q8N4F4 322 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NOXO1Q8NFA2 376 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 OR4K5Q8NGD3 323 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 OR1J2Q8NGS2 313 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 VANGL1Q8TAA9 524 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BCAS4Q8TDM0 211 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ASB10Q8WXI3 467 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 AKAP1Q92667 903 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 FAM162AQ96A26 154 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 PIK3IP1Q96FE7 263 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 TPD52L3Q96J77 140 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 COG8Q96MW5 612 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ALKBH3Q96Q83 286 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RBP7Q96R05 134 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 OR14A2Q96R54 314 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CCL19Q99731 98 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BTBD10Q9BSF8 475 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 DGCR6LQ9BY27 220 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RACGAP1Q9H0H5 632 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 PLK3Q9H4B4 646 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CA10Q9NS85 328 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ARL8BQ9NVJ2 186 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM38BQ9NVV0 291 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NKIRAS2Q9NYR9 191 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CISD1Q9NZ45 108 aaKnown RBP4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ADA2Q9NZK5 511 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF224Q9NZL3 707 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NPAP1Q9NZP6 1156 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 SEC14L4Q9UDX3 406 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 BAIAP2Q9UQB8 552 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CACNA1CQ13936 2221 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ABCA4P78363 2273 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 IGHV2OR16-5A0A0B4J2B6 119 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 IGHV1-18A0A0C4DH31 117 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 TEX13CA0A0J9YWL9 993 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 TCRBV3S1A0A5B6 114 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 PRSS37A4D1T9 235 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 BLOC1S5-TXNDC5H3BN57 136 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 XKRYO14609 159 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 TRMUO75648 421 aaKnown RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 GADD45GO95257 159 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 STAMBPO95630 424 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 MMP7P09237 267 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SAGP10523 405 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 PF4V1P10720 104 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 IFI30P13284 250 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 MAKP20794 623 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 NR4A1P22736 598 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SLC6A6P31641 620 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 LIPAP38571 399 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 GUCA1AP43080 201 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 RPS6KA3P51812 740 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 CDH11P55287 796 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 FOXG1P55316 489 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms