RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 COX5BP10606 129 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 ZNF823P16415 610 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 PYCR1P32322 319 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
PCIF1-202ENST00000479348 CDC42P60953 191 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 EFNB1P98172 346 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 PSG4Q00888 419 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
PCIF1-202ENST00000479348 PABPC1L2AQ5JQF8 200 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 SLC35D3Q5M8T2 416 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 UGT2A3Q6UWM9 527 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 CXXC5Q7LFL8 322 aaKnown RBP12.13□□□□□ -0.47
PCIF1-202ENST00000479348 CPOQ8IVL8 374 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 OTULINQ96BN8 352 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 FOXN4Q96NZ1 517 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 CDADC1Q9BWV3 514 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 HINT3Q9NQE9 182 aaKnown RBP12.13□□□□□ -0.47
PCIF1-202ENST00000479348 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
PCIF1-202ENST00000479348 IGHV2OR16-5A0A0B4J2B6 119 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 E9PQ18 207 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 PRKYO43930 277 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 GLCEO94923 617 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 SNAP29O95721 258 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 GYPBP06028 91 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 CELA3BP08861 270 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 CLUP10909 449 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 APLNRP35414 380 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 TEX30Q5JUR7 227 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 ZNF584Q8IVC4 421 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 OR8J1Q8NGP2 316 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 OR2AJ1Q8NGZ0 328 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 LILRB1Q8NHL6 650 aaPredicted RBP12.12□□□□□ -0.47
PCIF1-202ENST00000479348 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 TRUB1Q8WWH5 349 aaKnown RBP12.12□□□□□ -0.47
PCIF1-202ENST00000479348 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCIF1-202ENST00000479348 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 HCAR1Q9BXC0 346 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 WNT5BQ9H1J7 359 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 OR51V1Q9H2C8 321 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 MED20Q9H944 212 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 RNPEPL1Q9HAU8 725 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 MRPL22Q9NWU5 206 aaKnown RBP12.12□□□□□ -0.47
PCIF1-202ENST00000479348 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 ATPIF1Q9UII2 106 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
PCIF1-202ENST00000479348 SGCEO43556 437 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 GPANK1O95872 356 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 ZNF35P13682 527 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 STOMP27105 288 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 GGT2P36268 569 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 CDH11P55287 796 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 MEP1BQ16820 701 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 PCK2Q16822 640 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 LINC01590Q5TEZ4 76 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 MYPOPQ86VE0 399 aaPredicted RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 TCEANCQ8N8B7 351 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 NUP37Q8NFH4 326 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 OR51L1Q8NGJ5 315 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 OR6K6Q8NGW6 343 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 ZNRF4Q8WWF5 429 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 FBXW5Q969U6 566 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 VCXQ9H320 206 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 MARCH7Q9H992 704 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 SMPD3Q9NY59 655 aaPredicted RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 PLEK2Q9NYT0 353 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 CISD1Q9NZ45 108 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 CYB5R1Q9UHQ9 305 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 NDRG4Q9ULP0 352 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 COMMD3-BMI1R4GMX3 469 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 CADP27708 2225 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 VSTM5A8MXK1 200 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 SLC2A5P22732 501 aa12.11□□□□□ -0.47
PCIF1-202ENST00000479348 APEX1P27695 318 aaKnown RBP12.11□□□□□ -0.47
PCIF1-202ENST00000479348 PEX2P28328 305 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms