RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 TTTY10Q9BZA0 68 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 PIGMQ9H3S5 423 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 PNRC2Q9NPJ4 139 aaKnown RBP11.47□□□□□ -0.57
CHD3-210ENST00000479080 CLEC2DQ9UHP7 191 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
CHD3-210ENST00000479080 A0A1B0GUH1 482 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 A0A1W2PQL4 384 aaPredicted RBP11.46□□□□□ -0.57
CHD3-210ENST00000479080 EFCAB10A6NFE3 127 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 C12orf71A8MTZ7 269 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 EEF1E1-BLOC1S5C9J1V9 151 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ZNF593O00488 134 aaPredicted RBP11.46□□□□□ -0.57
CHD3-210ENST00000479080 EEF1E1O43324 174 aaKnown RBP11.46□□□□□ -0.57
CHD3-210ENST00000479080 RAD51DO75771 328 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 KRT33AO76009 404 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 HLA-DQA2P01906 255 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 SPARCP09486 303 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ALOX5APP20292 161 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 MAP2K4P45985 399 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ETV1P50549 477 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 CSNK2BP67870 215 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 TUBA1BP68363 451 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 TUBA4AP68366 448 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ADAM8P78325 824 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 SRSF1Q07955 248 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHD3-210ENST00000479080 FAM27E3Q08E93 113 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 CCDC92Q53HC0 331 aaPredicted RBP11.46□□□□□ -0.57
CHD3-210ENST00000479080 FAM27BQ5VT28 67 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 SEZ6L2Q6UXD5 910 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 TUBA1AQ71U36 451 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 MRGPRGQ86SM5 289 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 LRRC18Q8N456 261 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 OTOSQ8NHW6 89 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 ITLN2Q8WWU7 325 aaPredicted RBP11.46□□□□□ -0.57
CHD3-210ENST00000479080 ZNF75AQ96N20 296 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 SIAEQ9HAT2 523 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 TPRKBQ9Y3C4 175 aa11.46□□□□□ -0.57
CHD3-210ENST00000479080 RP1L1Q8IWN7 2480 aaPredicted RBP11.46□□□□□ -0.58
CHD3-210ENST00000479080 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 FAM90A27PA6NNH2 459 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 DVL2O14641 736 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 RAB36O95755 333 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 ABHD16AO95870 558 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 CST2P09228 141 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 PCMT1P22061 227 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 GRNP28799 593 aaKnown RBP11.45□□□□□ -0.58
CHD3-210ENST00000479080 CHRNB4P30926 498 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 BLVRAP53004 296 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 LSM6P62312 80 aaKnown RBP11.45□□□□□ -0.58
CHD3-210ENST00000479080 POU4F2Q12837 409 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 SFRP5Q5T4F7 317 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 ANKRD16Q6P6B7 361 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 BEND4Q6ZU67 534 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 SPARTQ8N0X7 666 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
CHD3-210ENST00000479080 TMEM80Q96HE8 168 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 ERVK13-1Q9NX77 482 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 GALNT8Q9NY28 637 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 SCN3BQ9NY72 215 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 ASH2LQ9UBL3 628 aa11.45□□□□□ -0.58
CHD3-210ENST00000479080 GDF2Q9UK05 429 aaPredicted RBP11.45□□□□□ -0.58
CHD3-210ENST00000479080 LSM2Q9Y333 95 aaKnown RBP11.45□□□□□ -0.58
CHD3-210ENST00000479080 A0A1W2PR80 420 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 SNTNA6NMZ2 147 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 RER1O15258 196 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 RGS10O43665 173 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 ZG16O60844 167 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 LALBAP00709 142 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 PTHP01270 115 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 HLA-HP01893 362 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 ZNF32P17041 273 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 NPR2P20594 1047 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 PSMB1P20618 241 aaKnown RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 DCKP27707 260 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 SH3BGRP55822 239 aaPredicted RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 TFF3Q07654 80 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 EIF2B1Q14232 305 aaKnown RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 RSPO1Q2MKA7 263 aaPredicted RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 FBXL19-AS1Q494R0 122 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 KLHL22Q53GT1 634 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 OR2G6Q5TZ20 316 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 RNLSQ5VYX0 342 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 ZNF773Q6PK81 442 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 PRSS48Q7RTY5 328 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 DCXRQ7Z4W1 244 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 ABHD12BQ7Z5M8 362 aaPredicted RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 LHFPL3Q86UP9 236 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 MYPOPQ86VE0 399 aaPredicted RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
CHD3-210ENST00000479080 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
CHD3-210ENST00000479080 OR10H4Q8NGA5 316 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms