RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-215	ENST00000478702	POP5	Q969H6	163 aa	Known RBP	13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	CLPTM1L	Q96KA5	538 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	FOXN4	Q96NZ1	517 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	DOK1	Q99704	481 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	PIMREG	Q9BSJ6	248 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	MRPL37	Q9BZE1	423 aa	Known RBP	13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	KCNN2	Q9H2S1	579 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	OR52D1	Q9H346	318 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	CDH20	Q9HBT6	801 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	POLE4	Q9NR33	117 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	VSX1	Q9NZR4	365 aa	Predicted RBP	13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	TMCC3	Q9ULS5	477 aa		13.55	□□□□□ -0.24
GARNL3-215	ENST00000478702	NDUFS8	O00217	210 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	SOCS2	O14508	198 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	KRT36	O76013	467 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	PPP1R3D	O95685	299 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	IGFBP1	P08833	259 aa	Predicted RBP	13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	CCL2	P13500	99 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	APEX1	P27695	318 aa	Known RBP	13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	LAP3	P28838	519 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	SLC6A6	P31641	620 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	EVX1	P49640	407 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	RPS6KA3	P51812	740 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	HMGA2	P52926	109 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	ENDOG	Q14249	297 aa	Known RBP	13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	C1orf94	Q6P1W5	598 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	ZNF620	Q6ZNG0	422 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	PTCHD4	Q6ZW05	846 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	OR4C15	Q8NGM1	316 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	OR1J2	Q8NGS2	313 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	C1orf159	Q96HA4	380 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	BTBD10	Q9BSF8	475 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	SYT4	Q9H2B2	425 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	DYNLRB1	Q9NP97	96 aa		13.54	□□□□□ -0.24
GARNL3-215	ENST00000478702	TENM1	Q9UKZ4	2725 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	TNFRSF11B	O00300	401 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	ACOT8	O14734	319 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	TGFA	P01135	160 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	APLNR	P35414	380 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	PSG4	Q00888	419 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	TSPAN31	Q12999	210 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	CR1L	Q2VPA4	569 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	RFX4	Q33E94	735 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	DNAL1	Q4LDG9	190 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	FAM98B	Q52LJ0	330 aa	Known RBP	13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	LINC00471	Q8N535	108 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	CPEB3	Q8NE35	698 aa	Known RBP	13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	OR9Q2	Q8NGE9	314 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	VRK1	Q99986	396 aa	Predicted RBP	13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	THTPA	Q9BU02	230 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	ZNF416	Q9BWM5	594 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	TRIM15	Q9C019	465 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	OR2H1	Q9GZK4	316 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	BPESC1	Q9GZL8	116 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	WNT5B	Q9H1J7	359 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	LRMDA	Q9H2I8	198 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	VNN3	Q9NY84	501 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	IER3IP1	Q9Y5U9	82 aa		13.53	□□□□□ -0.24
GARNL3-215	ENST00000478702	LOC390937	A0A1W2PQ73	354 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	C12orf71	A8MTZ7	269 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702		M0R233	179 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	IMPA2	O14732	288 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	ARPC3	O15145	178 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	SCG5	P05408	212 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	FAM157B	P0CG42	384 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	ZNF23	P17027	643 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	HNF1A	P20823	631 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	STOM	P27105	288 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	GUCA1A	P43080	201 aa	Predicted RBP	13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	PCBD1	P61457	104 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	TRAP1	Q12931	704 aa	Known RBP	13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	SYT9	Q86SS6	491 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	AKR7L	Q8NHP1	331 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	GNPDA2	Q8TDQ7	276 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	POM121L2	Q96KW2	1035 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	LRGUK	Q96M69	825 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	ERMAP	Q96PL5	475 aa	Predicted RBP	13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	SNX18	Q96RF0	628 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	SYT3	Q9BQG1	590 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	WAC	Q9BTA9	647 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	RAB1B	Q9H0U4	201 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	EMC7	Q9NPA0	242 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	CDH10	Q9Y6N8	788 aa		13.52	□□□□□ -0.25
GARNL3-215	ENST00000478702	TANC2	Q9HCD6	1990 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	LOC100509620	A0A075B734	347 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	LRP5L	A4QPB2	252 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	SYNGR3	O43761	229 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	SLC16A7	O60669	478 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	ICMT	O60725	284 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	KHDRBS3	O75525	346 aa	Known RBP	13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	CCNB2	O95067	398 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	STAMBP	O95630	424 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	ERCC1	P07992	297 aa	Predicted RBP	13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	RAP2A	P10114	183 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	CDKN2A	P42771	156 aa	Known RBP	13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	CARTPT	Q16568	116 aa		13.51	□□□□□ -0.25
GARNL3-215	ENST00000478702	LIPN	Q5VXI9	398 aa		13.51	□□□□□ -0.25

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