RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 GPX7Q96SL4 187 aaPredicted RBP6.93□□□□□ -1.3
DDX39B-218ENST00000478365 EMC6Q9BV81 110 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 MRPL13Q9BYD1 178 aaKnown RBP6.93□□□□□ -1.3
DDX39B-218ENST00000478365 S100A14Q9HCY8 104 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 ZC4H2Q9NQZ6 224 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 ZNF701Q9NV72 531 aaPredicted RBP6.93□□□□□ -1.3
DDX39B-218ENST00000478365 TMEM38BQ9NVV0 291 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 CISD1Q9NZ45 108 aaKnown RBP6.93□□□□□ -1.3
DDX39B-218ENST00000478365 NPAP1Q9NZP6 1156 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 GMPR2Q9P2T1 348 aaKnown RBP6.93□□□□□ -1.3
DDX39B-218ENST00000478365 RHCGQ9UBD6 479 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 GRHPRQ9UBQ7 328 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 DAPK2Q9UIK4 370 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 TLN2Q9Y4G6 2542 aa6.93□□□□□ -1.3
DDX39B-218ENST00000478365 A0A1W2PPR1 153 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SLC22A23A1A5C7 686 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 UNC119BA6NIH7 251 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 FAM171A2A8MVW0 826 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 H3BSA7 217 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 hCG_2039718K7EN88 272 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 NDUFA2O43678 99 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 PIP5K1CO60331 668 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 OR10H3O60404 316 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 F13BP05160 661 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 QDPRP09417 244 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 RAP2AP10114 183 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SLC6A6P31641 620 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 APOBEC3AP31941 199 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-218ENST00000478365 LIMS1P48059 325 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 HMGA2P52926 109 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 FOXG1P55316 489 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-218ENST00000478365 CTXN1P60606 82 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 PCBD1P61457 104 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 VBP1P61758 197 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 POLR2GP62487 172 aaKnown RBP eCLIP6.92□□□□□ -1.3
DDX39B-218ENST00000478365 MRPS34P82930 218 aaKnown RBP6.92□□□□□ -1.3
DDX39B-218ENST00000478365 NAAAQ02083 359 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 PLP2Q04941 152 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 CD47Q08722 323 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 KRR1Q13601 381 aaKnown RBP6.92□□□□□ -1.3
DDX39B-218ENST00000478365 MELKQ14680 651 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 ARMC4Q5T2S8 1044 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 DNM1P34Q6PK57 102 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SMARCD3Q6STE5 483 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 DPY19L2P2Q6ZN68 376 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 LINGO2Q7L985 606 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 C1orf174Q8IYL3 243 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SLC22A24Q8N4F4 322 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 KBTBD8Q8NFY9 601 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 OR52L1Q8NGH7 329 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 OR1J2Q8NGS2 313 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 MOSPD2Q8NHP6 518 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 NRGNQ92686 78 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 KCNK17Q96T54 332 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 THTPAQ9BU02 230 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 NELFAQ9H3P2 528 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 ZNF442Q9H7R0 627 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SIAEQ9HAT2 523 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 CBLN4Q9NTU7 201 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 SLC7A8Q9UHI5 535 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 PMF1-BGLAPU3KQ54 211 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 V9GYQ6 96 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
DDX39B-218ENST00000478365 TRAV27A0A087WT01 109 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 A0A096LPE4 126 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 IGHV1-18A0A0C4DH31 117 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 TRBV4-1A0A0J9YWV2 114 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 ARRDC5A6NEK1 342 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 OVOL3O00110 214 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 TNFRSF11BO00300 401 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 IMPA2O14732 288 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 TXNDC12O95881 172 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 DANCRP0C864 163 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 CD79AP11912 226 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 B4GALT1P15291 398 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 MAKP20794 623 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 GSTM3P21266 225 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 ATP6V1B2P21281 511 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 PCSK6P29122 969 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 SDHAP31040 664 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 ACVR1BP36896 505 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 GPR4P46093 362 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 OMPP47874 163 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 PTH2RP49190 550 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 FABP6P51161 128 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 IDH3GP51553 393 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 SNRPD2P62316 118 aaKnown RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 NKX6-1P78426 367 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 GALK2Q01415 458 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 RELQ04864 619 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 LGALS3BPQ08380 585 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 NPRL3Q12980 569 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 TOP3AQ13472 1001 aaPredicted RBP6.91□□□□□ -1.3
DDX39B-218ENST00000478365 FLOT2Q14254 428 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 LRRC36Q1X8D7 754 aa6.91□□□□□ -1.3
DDX39B-218ENST00000478365 Q3ZCU0 254 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms