RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 MEGF11A6BM72 1044 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MT-ND4P03905 459 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 IFNGR1P15260 489 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF823P16415 610 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 PSMB1P20618 241 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MPLP40238 635 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 RPS27P42677 84 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 FCN2Q15485 313 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ETFDHQ16134 617 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CCDC92Q53HC0 331 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ASPHD2Q6ICH7 369 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 C3orf33Q6P1S2 294 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF704Q6ZNC4 412 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 C16orf47Q6ZP98 133 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CREB3L2Q70SY1 520 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 LILRB4Q8NHJ6 448 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 RNF133Q8WVZ7 376 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 SLC25A28Q96A46 364 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 SPACA9Q96E40 222 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 G6PC2Q9NQR9 355 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 KLRF1Q9NZS2 232 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 RCE1Q9Y256 329 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 TRAV6A0A075B6T7 132 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MEIKINA0A087WXM9 373 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 LOC100289279A0A1B0GTE1 492 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 A0A1W2PQ72 361 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CIB4A0PJX0 185 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 A6NJ64 397 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MEN1O00255 615 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CD2P06729 351 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ANXA3P12429 323 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 P2RY4P51582 365 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MFGE8Q08431 387 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 PCOLCEQ15113 449 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 RAB11BQ15907 218 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 Q5BKY6 102 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 TMEM225Q6GV28 225 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF782Q6ZMW2 699 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 IZUMO1Q8IYV9 350 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 BMPERQ8N8U9 685 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 OR11G2Q8NGC1 345 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 OR11H7Q8NGC8 314 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 IFI44Q8TCB0 444 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 NPAS1Q99742 590 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 B3GAT1Q9P2W7 334 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ING1Q9UK53 422 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ING4Q9UNL4 249 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 A0A087WZY1 265 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 H7C417 338 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 SULT1C2O00338 296 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CTAG2O75638 210 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MAS1P04201 325 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 UBCP0CG48 685 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 TCEA1P23193 301 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 EIF1P41567 113 aaKnown RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MMP16P51512 607 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CCR6P51684 374 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CLDN12P56749 244 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 THEM4Q5T1C6 240 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 GLT8D1Q68CQ7 371 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CMKLR1Q99788 373 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF700Q9H0M5 742 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 PLSCR3Q9NRY6 295 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 CKLFQ9UBR5 152 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
PTPRF-212ENST00000477970 GGT3PA6NGU5 568 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 EFNA2O43921 213 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 IL5P05113 134 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 LAMTOR1Q6IAA8 161 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 LCN10Q6JVE6 187 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 GLB1L2Q8IW92 636 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 GIMAP1Q8WWP7 306 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZBTB8AQ96BR9 441 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ARRDC1-AS1Q9H2J1 176 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 HHLA2Q9UM44 414 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 RP1P56715 2156 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 UNC13CQ8NB66 2214 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF780AO75290 641 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 CPN1P15169 458 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 FOXL2P58012 376 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 RPS15P62841 145 aaKnown RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZFP36L1Q07352 338 aaKnown RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 METTL11BQ5VVY1 283 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 NDUFAF7Q7L592 441 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ARMC10Q8N2F6 343 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 NKAIN3Q8N8D7 197 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 DNAAF1Q8NEP3 725 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 RASL10BQ96S79 203 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 MESP1Q9BRJ9 268 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 DIABLOQ9NR28 239 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF107Q9UII5 783 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 SLC22A13Q9Y226 551 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 HDGFL3Q9Y3E1 203 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 HRH3Q9Y5N1 445 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms