RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 DKK4Q9UBT3 224 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 DKKL1Q9UK85 242 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 A0A1B0GTI1 187 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF879B4DU55 563 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 CRYGSP22914 178 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 MAGEB1P43366 347 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 RPS7P62081 194 aaKnown RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 LSM6P62312 80 aaKnown RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF45Q02386 682 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 CCDC92Q53HC0 331 aaPredicted RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 HBMQ6B0K9 141 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 PLPP7Q8NBV4 271 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 NEIL3Q8TAT5 605 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 WDYHV1Q96HA8 205 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 FOXN4Q96NZ1 517 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 PRDM14Q9GZV8 571 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 NELFAQ9H3P2 528 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 GLTPQ9NZD2 209 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 GNG8Q9UK08 70 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 PNMA8CA0A1B0GUJ8 204 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 NPIPA5E9PKD4 350 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 TMEM127O75204 238 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 UPK1BO75841 260 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 CFL1P23528 166 aaKnown RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 SLC25A25Q6KCM7 469 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 PPP1R14AQ96A00 147 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
PRPF39-203ENST00000477626 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF319Q9P2F9 582 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 KLK13Q9UKR3 277 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 NPIPA1Q9UND3 350 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 TMEM14AQ9Y6G1 99 aa10.7□□□□□ -0.7
PRPF39-203ENST00000477626 GJE1A6NN92 205 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 PSMD9O00233 223 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 GPR171O14626 319 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 F10P00742 488 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 IGHG1P01857 330 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 PDGFAP04085 211 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 MEOX1P50221 254 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 NRN1LQ496H8 165 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 AGAP7PQ5VUJ5 663 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 RAET1LQ5VY80 246 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 SNX29P2Q8IUI4 249 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 SNIP1Q8TAD8 396 aaKnown RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF75AQ96N20 296 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 AGAP4Q96P64 663 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 LINC00470Q9BZP3 86 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 CHCHD3Q9NX63 227 aaKnown RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 BOKQ9UMX3 212 aaPredicted RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 R4GMQ9 66 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 XKRYO14609 159 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 KHDRBS3O75525 346 aaKnown RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 EPXP11678 715 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 CSNK2A1P68400 391 aaPredicted RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 RIPPLY2Q5TAB7 128 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 KIAA1143Q96AT1 154 aaPredicted RBP10.69□□□□□ -0.7
PRPF39-203ENST00000477626 OTULINQ96BN8 352 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 SNTG1Q9NSN8 517 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 GALNT8Q9NY28 637 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 PEX16Q9Y5Y5 336 aa10.69□□□□□ -0.7
PRPF39-203ENST00000477626 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 EVX1P49640 407 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 GBX2P52951 348 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ARL9Q6T311 187 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ASB5Q8WWX0 329 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
PRPF39-203ENST00000477626 SLC24A3Q9HC58 644 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 RELNP78509 3460 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF724A8MTY0 619 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 LDLRAD4O15165 306 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ITGB2P05107 769 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ATF1P18846 271 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.73e-11■■■■■ 42.1
PRPF39-203ENST00000477626 RBMS1P29558 406 aaKnown RBP10.68□□□□□ -0.7
PRPF39-203ENST00000477626 STARP49675 285 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 HGFACQ04756 655 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ABHD17BQ5VST6 288 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 SFXN4Q6P4A7 337 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 DCDC5Q6ZRR9 648 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 CLEC1AQ8NC01 280 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
PRPF39-203ENST00000477626 FBXO17Q96EF6 278 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 DOCK7Q96N67 2140 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ARGFXA6NJG6 315 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 TMEM212A6NML5 194 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 MMP7P09237 267 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-203ENST00000477626 CDAP32320 146 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ADAM8P78325 824 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 SLC3A1Q07837 685 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 CAMK2DQ13557 499 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 INAQ16352 499 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 OR6N2Q8NGY6 317 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 RELTQ969Z4 430 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 ABCB9Q9NP78 766 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms