RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CBLN4Q9NTU7 201 aa11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-207ENST00000477573 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 TMEM202A6NGA9 273 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 PYCARD-AS1I3L0S3 204 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 TMEM127O75204 238 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 NME2P22392 152 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 CD1CP29017 333 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 RBM34P42696 430 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 ENPP2Q13822 863 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 CST6Q15828 149 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 GRHL2Q6ISB3 625 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 ADAMTSL4Q6UY14 1074 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 FAM83HQ6ZRV2 1179 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC35D2Q76EJ3 337 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 OR1J2Q8NGS2 313 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 OR8U1Q8NH10 309 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 FCAMRQ8WWV6 532 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 GEMIN6Q8WXD5 167 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 NTNG2Q96CW9 530 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 LINC00615Q96LM1 132 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 HAO2Q9NYQ3 351 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 C5orf42Q9H799 3197 aa11.49□□□□□ -0.57
RTFDC1-207ENST00000477573 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 K7ESM1 405 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 KCNAB3O43448 404 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 PLRG1O43660 514 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 TLX2O43763 284 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2C1O95371 312 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 EPORP19235 508 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 AKT2P31751 481 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 CD80P33681 288 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 APLNRP35414 380 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 SOX18P35713 384 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 MTNR1AP48039 350 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 RPS14P62263 151 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 IRF8Q02556 426 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 PIP5KL1Q5T9C9 394 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 AGTRAPQ6RW13 159 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 SMARCD3Q6STE5 483 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 ENPP7Q6UWV6 458 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 RGL4Q8IZJ4 473 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 OR5D16Q8NGK9 328 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 THRSPQ92748 146 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 FGF11Q92914 225 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 ATG10Q9H0Y0 220 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 CUTCQ9NTM9 273 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 CLEC1BQ9P126 229 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 PITPNC1Q9UKF7 332 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 MAGEB17A8MXT2 336 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 GPRIN2O60269 458 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 CYB5R3P00387 301 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 ARG1P05089 322 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 SDC1P18827 310 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 TEAD1P28347 426 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 PFN3P60673 137 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 OR5I1Q13606 314 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 LY6G6FQ5SQ64 297 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 KLHDC8AQ8IYD2 350 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 COMMD1Q8N668 190 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 TMEM104Q8NE00 496 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 FAAP24Q9BTP7 215 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 DPEP2Q9H4A9 486 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 POT1Q9NUX5 634 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 ENPP4Q9Y6X5 453 aa11.48□□□□□ -0.57
RTFDC1-207ENST00000477573 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 SERTM1A2A2V5 107 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CBY3A6NI87 242 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 H3BN98 237 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PDYNP01213 254 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 TK1P04183 234 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CST2P09228 141 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CDC34P49427 236 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 HMGCS1Q01581 520 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CHIT1Q13231 466 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 INSL4Q14641 139 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PRPF38BQ5VTL8 546 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 FRG2Q64ET8 278 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF776Q68DI1 518 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PRSS45Q7RTY3 260 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 GALNTL5Q7Z4T8 443 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR5M8Q8NGP6 311 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2L2Q8NH16 312 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms