RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-211	ENST00000476855	MED13L	Q71F56	2210 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	EFCAB10	A6NFE3	127 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	MSTN	O14793	375 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	SEC14L2	O76054	403 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	HTR1A	P08908	422 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	MRPL3	P09001	348 aa	Known RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	BMP5	P22003	454 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	NAA10	P41227	235 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ARF1	P84077	181 aa	Known RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	MVK	Q03426	396 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	PCK2	Q16822	640 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	NRN1L	Q496H8	165 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	TEX30	Q5JUR7	227 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	MTFR2	Q6P444	385 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	AHSA2	Q719I0	299 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ERI1	Q8IV48	349 aa	Known RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF295-AS1	Q8N0V1	137 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF540	Q8NDQ6	660 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	POM121	Q96HA1	1249 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	INTS14	Q96SY0	518 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	CNN2	Q99439	309 aa	Known RBP	13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF696	Q9H7X3	374 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	SEC61A2	Q9H9S3	476 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	BLOC1S6	Q9UL45	172 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855	PKDREJ	Q9NTG1	2253 aa		13.92	□□□□□ -0.18
PSMD4-211	ENST00000476855		A8MXE2	369 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	DVL2	O14641	736 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	TNFAIP8	O95379	198 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	IGHA1	P01876	353 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	HLA-DQA2	P01906	255 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	CDK1	P06493	297 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	MSR1	P21757	451 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	SSTR2	P30874	369 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	ENTPD1	P49961	510 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	SH3BGR	P55822	239 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	LSM6	P62312	80 aa	Known RBP	13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	ST3GAL4	Q11206	333 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	ENDOG	Q14249	297 aa	Known RBP	13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	KLHL22	Q53GT1	634 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	C9orf135	Q5VTT2	229 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	BEND4	Q6ZU67	534 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	SLC16A9	Q7RTY1	509 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	CDC20B	Q86Y33	519 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	OR1K1	Q8NGR3	316 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	OR6N2	Q8NGY6	317 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	SMAP2	Q8WU79	429 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	BOD1	Q96IK1	185 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF649	Q9BS31	505 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	COPS4	Q9BT78	406 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	JAM3	Q9BX67	310 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	EMC7	Q9NPA0	242 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	TAS2R16	Q9NYV7	291 aa		13.91	□□□□□ -0.18
PSMD4-211	ENST00000476855	NIPBL	Q6KC79	2804 aa	eCLIP	13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	IRGM	A1A4Y4	181 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	PTGES3L	E9PB15	166 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	LYN	P07948	512 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	B4GALT1	P15291	398 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	NPR2	P20594	1047 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	RPS27	P42677	84 aa	Known RBP	13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ADAM8	P78325	824 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	PIGF	Q07326	219 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	FAM27B	Q5VT28	67 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	KLHL24	Q6TFL4	600 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF813	Q6ZN06	617 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	SLC35F2	Q8IXU6	374 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	SLC22A24	Q8N4F4	322 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	RFLNB	Q8N5W9	214 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	BCL2L2	Q92843	193 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF416	Q9BWM5	594 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	YIPF3	Q9GZM5	350 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	SIAE	Q9HAT2	523 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	CCNB1IP1	Q9NPC3	277 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF224	Q9NZL3	707 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ERVK-18	Q9QC07	812 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	KCNG2	Q9UJ96	466 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	DIMT1	Q9UNQ2	313 aa	Known RBP	13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	COPS3	Q9UNS2	423 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	KLHDC2	Q9Y2U9	406 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	LHFPL6	Q9Y693	200 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	PRR14L	Q5THK1	2151 aa		13.9	□□□□□ -0.18
PSMD4-211	ENST00000476855	ZNF593	O00488	134 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	RAB36	O95755	333 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	FADS2	O95864	444 aa	Known RBP	13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	ZNF823	P16415	610 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	C21orf33	P30042	268 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	CHRNB4	P30926	498 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	HCCS	P53701	268 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	CDH15	P55291	814 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	IRF3	Q14653	427 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	GABRA6	Q16445	453 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	SGCA	Q16586	387 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	XKRX	Q6PP77	449 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	DPY19L4	Q7Z388	723 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	LUZP2	Q86TE4	346 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	CDH24	Q86UP0	819 aa		13.89	□□□□□ -0.19
PSMD4-211	ENST00000476855	CXorf67	Q86X51	503 aa	Predicted RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms