RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 MUC15Q8N387 334 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 LNX2Q8N448 690 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 CYB561A3Q8NBI2 242 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 NPEPL1Q8NDH3 523 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 WFDC11Q8NEX6 87 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 OR52L1Q8NGH7 329 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 TMEM171Q8WVE6 324 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 PYDC1Q8WXC3 89 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-208ENST00000476739 KCNS3Q9BQ31 491 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 WNT5BQ9H1J7 359 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 SEMA6AQ9H2E6 1030 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 MOV10Q9HCE1 1003 aaKnown RBP8.38□□□□□ -1.07
HDAC3-208ENST00000476739 RPRD1BQ9NQG5 326 aaKnown RBP8.38□□□□□ -1.07
HDAC3-208ENST00000476739 CA10Q9NS85 328 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 B9D1Q9UPM9 204 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 LRCH1Q9Y2L9 728 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 AP4S1Q9Y587 144 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 ARID1AO14497 2285 aa8.38□□□□□ -1.07
HDAC3-208ENST00000476739 LOC100509620A0A075B734 347 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 DPPA5A6NC42 116 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 H3BNX3 289 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 DEAF1O75398 565 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 RENP00797 406 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 TFP02787 698 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 GAAP10253 952 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 CLUP10909 449 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 PSKH1P11801 424 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 NR4A1P22736 598 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 APOBEC3AP31941 199 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 CENPAP49450 140 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 DAPP51397 102 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ADAM8P78325 824 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 SNTB2Q13425 540 aaKnown RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ADIPOQQ15848 244 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 SWI5Q1ZZU3 235 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ACSM5Q6NUN0 579 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF774Q6NX45 483 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF544Q6NX49 715 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 LYPD4Q6UWN0 246 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ZBTB46Q86UZ6 589 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 GLB1L2Q8IW92 636 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 SLC37A3Q8NCC5 494 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 SLC30A7Q8NEW0 376 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 NUP37Q8NFH4 326 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 OR51L1Q8NGJ5 315 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 OR5K1Q8NHB7 308 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 SNX18Q96RF0 628 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 GSX2Q9BZM3 304 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 OR2H1Q9GZK4 316 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 RNPEPL1Q9HAU8 725 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 CCNB1IP1Q9NPC3 277 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 CBLN4Q9NTU7 201 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF701Q9NV72 531 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 GDF2Q9UK05 429 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-208ENST00000476739 ARFGEF3Q5TH69 2177 aa8.37□□□□□ -1.07
HDAC3-208ENST00000476739 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 TMEM129A0AVI4 362 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 H3BN98 237 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 IDH3BO43837 385 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 MITFO75030 526 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-208ENST00000476739 GYPBP06028 91 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 OR4A8P0C604 315 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FAM157BP0CG42 384 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 OSMP13725 252 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 ANXA8P13928 327 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 PAX1P15863 534 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FASP25445 335 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 POU1F1P28069 291 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 PYCR1P32322 319 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 ERVS71-1P61550 626 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 HSF2Q03933 536 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 COX10Q12887 443 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 DAG1Q14118 895 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 CRMP1Q14194 572 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 Q5PR19 223 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 AGAP6Q5VW22 663 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 TMEM236Q5W0B7 351 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FAHD1Q6P587 224 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 DPPA2Q7Z7J5 298 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FBXL14Q8N1E6 418 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 ATG16L2Q8NAA4 619 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 IL17RDQ8NFM7 739 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 OR2T33Q8NG76 320 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 OR4F15Q8NGB8 312 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 OR9Q1Q8NGQ5 310 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 TEX47Q8TBZ9 253 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 DNAJC9Q8WXX5 260 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 NRBF2Q96F24 287 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 PKP2Q99959 881 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 RBM4Q9BWF3 364 aaKnown RBP8.36□□□□□ -1.07
HDAC3-208ENST00000476739 HCAR1Q9BXC0 346 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms