RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 HPXP02790 462 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 IL5P05113 134 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 CPN1P15169 458 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF823P16415 610 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 PTGS2P35354 604 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 VEGFCP49767 419 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 RAB11BQ15907 218 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 NKAIN1Q4KMZ8 207 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF385CQ66K41 422 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-208ENST00000476724 GLT8D1Q68CQ7 371 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 DEGS2Q6QHC5 323 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 SEZ6L2Q6UXD5 910 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 GLDNQ6ZMI3 551 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-208ENST00000476724 OR51D1Q8NGF3 324 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 OR5L2Q8NGL0 311 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 OR8K3Q8NH51 312 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 RHBDD1Q8TEB9 315 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 DDIT4LQ96D03 193 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 AKIRIN1Q9H9L7 192 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-208ENST00000476724 NPDC1Q9NQX5 325 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-208ENST00000476724 FLVCR2Q9UPI3 526 aa14.75□□□□□ -0.05
TMEM53-208ENST00000476724 COA3Q9Y2R0 106 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-208ENST00000476724 MEGF11A6BM72 1044 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 NPIPA5E9PKD4 350 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 NDUFB6O95139 128 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 CSF1P09603 554 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 CD37P11049 281 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 IFNGR1P15260 489 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 FSTP19883 344 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 DNASE1P24855 282 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 MSX1P28360 303 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 POU3F4P49335 361 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 FBXW4P57775 412 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 SSBP1Q04837 148 aaKnown RBP14.74□□□□□ -0.05
TMEM53-208ENST00000476724 MELKQ14680 651 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 PCK2Q16822 640 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 THOC7Q6I9Y2 204 aaKnown RBP14.74□□□□□ -0.05
TMEM53-208ENST00000476724 FAM166AQ6J272 317 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 SPICQ8N5J4 248 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 ASB5Q8WWX0 329 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 ASB10Q8WXI3 467 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 FAM3DQ96BQ1 224 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 LOXL4Q96JB6 756 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 POTEKPQ9BYX7 375 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 NPIPA1Q9UND3 350 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 SLC22A13Q9Y226 551 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 LRP12Q9Y561 859 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 R4GMQ9 66 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 EXPH5Q8NEV8 1989 aa14.74□□□□□ -0.05
TMEM53-208ENST00000476724 SNRPGP15A8MWD9 76 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 H0YC42 278 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ARPC1BO15143 372 aaKnown RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 AQP8O94778 261 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 TPOP07202 933 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 TMIGD3P0DMS9 266 aaPredicted RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 CCL4P13236 92 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 DCTDP32321 178 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ZFP36L1Q07352 338 aaKnown RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 C2orf76Q3KRA6 126 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ZBTB37Q5TC79 503 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 OR7E24Q6IFN5 339 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 NDUFAF7Q7L592 441 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 SLC26A10Q8NG04 563 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 OR11H4Q8NGC9 324 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 RNF138Q8WVD3 245 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 PMEPA1Q969W9 287 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 FOXN4Q96NZ1 517 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 FANCFQ9NPI8 374 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 SLC23A1Q9UHI7 598 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 GTF2A1LQ9UNN4 478 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 PCDHGA5Q9Y5G8 931 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 VSTM2BA6NLU5 285 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ETV2O00321 342 aaPredicted RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ONECUT2O95948 504 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ISG15P05161 165 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ITGA5P08648 1049 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF883P0CG24 379 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF28P17035 718 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 PER3P56645 1201 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 LINC00303Q3SY05 128 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 TMEM225Q6GV28 225 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 FAM109AQ8N4B1 249 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 MS4A3Q96HJ5 214 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 BEX1Q9HBH7 125 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 B3GNT2Q9NY97 397 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ELF5Q9UKW6 265 aaPredicted RBP14.73□□□□□ -0.05
TMEM53-208ENST00000476724 HHLA2Q9UM44 414 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 ALPK2Q86TB3 2170 aa14.73□□□□□ -0.05
TMEM53-208ENST00000476724 SRSF10O75494 262 aaKnown RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 HRGP04196 525 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 FGF5P12034 268 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 PTHLHP12272 177 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 HLA-DOBP13765 273 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 IGFBP3P17936 291 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ACP1P24666 158 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ZP1P60852 638 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 DCDP81605 110 aaKnown RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 C19orf57Q0VDD7 668 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 OR7A5Q15622 319 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms