RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PRPF19Q9UMS4 504 aaKnown RBP18.15■□□□□ 0.5
LIME1-204ENST00000476183 TIMM10BQ9Y5J6 103 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 C5orf49A4QMS7 147 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 NDUFS8O00217 210 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 SLC16A7O60669 478 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 STAMBPO95630 424 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 LCKP06239 509 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 APEHP13798 732 aaKnown RBP18.14■□□□□ 0.49
LIME1-204ENST00000476183 ZNF250P15622 560 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 RAD52P43351 418 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 NR4A2P43354 598 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 PCBD1P61457 104 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 KRTAP21-3Q3LHN1 58 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 TRPM8Q7Z2W7 1104 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 ADCK1Q86TW2 530 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 OR9Q2Q8NGE9 314 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 OR4C15Q8NGM1 316 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 BCAS4Q8TDM0 211 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 SAMD8Q96LT4 415 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 ERMAPQ96PL5 475 aaPredicted RBP18.14■□□□□ 0.49
LIME1-204ENST00000476183 BTBD10Q9BSF8 475 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 BCL2L14Q9BZR8 327 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 NUAK2Q9H093 628 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 C1orf21Q9H246 121 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 RERGLQ9H628 205 aa18.14■□□□□ 0.49
LIME1-204ENST00000476183 COA3Q9Y2R0 106 aaPredicted RBP18.14■□□□□ 0.49
LIME1-204ENST00000476183 IGLV3-9A0A075B6K5 115 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 A0A1W2PPW3 197 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 C12orf71A8MTZ7 269 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 LYNX1G3V0Z9 82 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 TNFRSF11BO00300 401 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 KHDRBS3O75525 346 aaKnown RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 KRT36O76013 467 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 MPZL1O95297 269 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 TP53P04637 393 aaPredicted RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 ERCC1P07992 297 aaPredicted RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 LYNX1P0DP58 116 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 NAT2P11245 290 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 USF1P22415 310 aaPredicted RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 SLC6A6P31641 620 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 IFNGR2P38484 337 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 GDI2P50395 445 aaKnown RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 PPP2R2BQ00005 443 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 DBPQ10586 325 aaPredicted RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 PPP1R8Q12972 351 aaKnown RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 TSPAN31Q12999 210 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 ALKBH6Q3KRA9 238 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 SYT9Q86SS6 491 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 ICA1LQ8NDH6 482 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 SYNPRQ8TBG9 265 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 GNPDA2Q8TDQ7 276 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 CCDC124Q96CT7 223 aaKnown RBP18.13■□□□□ 0.49
LIME1-204ENST00000476183 TSSK2Q96PF2 358 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 BPESC1Q9GZL8 116 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 MAGIXQ9H6Y5 334 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 VNN3Q9NY84 501 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 TAAR3PQ9P1P4 343 aa18.13■□□□□ 0.49
LIME1-204ENST00000476183 IGHV4-61A0A0C4DH41 118 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 DCTN6O00399 190 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ACOT8O14734 319 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ARPC3O15145 178 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 UBOX5O94941 541 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 GPANK1O95872 356 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 GGTLC2Q14390 218 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 TMEM255AQ5JRV8 349 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ZNF770Q6IQ21 691 aaPredicted RBP18.12■□□□□ 0.49
LIME1-204ENST00000476183 ZNF620Q6ZNG0 422 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ALDH16A1Q8IZ83 802 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ZNF786Q8N393 782 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 OR1J1Q8NGS3 322 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 UBASH3BQ8TF42 649 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 C11orf40Q8WZ69 217 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 ASB9Q96DX5 294 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 THTPAQ9BU02 230 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 IFT27Q9BW83 186 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 TRIM15Q9C019 465 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 MS4A5Q9H3V2 200 aa18.12■□□□□ 0.49
LIME1-204ENST00000476183 SVEP1Q4LDE5 3571 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 MALRD1Q5VYJ5 2156 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 HPXP02790 462 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 HIST1H1CP16403 213 aaKnown RBP18.11■□□□□ 0.49
LIME1-204ENST00000476183 GIFP27352 417 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 KLF3P57682 345 aaPredicted RBP18.11■□□□□ 0.49
LIME1-204ENST00000476183 ELFN2Q5R3F8 820 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 SPATA46Q5T0L3 261 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 RFPL4BQ6ZWI9 263 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 GLB1L2Q8IW92 636 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 OR4K13Q8NH42 304 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 NMNAT3Q96T66 252 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 EGLN3Q9H6Z9 239 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 YAE1D1Q9NRH1 226 aa18.11■□□□□ 0.49
LIME1-204ENST00000476183 TLX2O43763 284 aaPredicted RBP18.1■□□□□ 0.49
LIME1-204ENST00000476183 NCR1O76036 304 aa18.1■□□□□ 0.49
LIME1-204ENST00000476183 NGFP01138 241 aa18.1■□□□□ 0.49
LIME1-204ENST00000476183 IGHV4-31P0DP07 118 aa18.1■□□□□ 0.49
LIME1-204ENST00000476183 NKPD1Q17RQ9 610 aa18.1■□□□□ 0.49
LIME1-204ENST00000476183 LEG1Q6P5S2 330 aa18.1■□□□□ 0.49
LIME1-204ENST00000476183 GTF3AQ92664 365 aaKnown RBP18.1■□□□□ 0.49
LIME1-204ENST00000476183 MARS2Q96GW9 593 aaKnown RBP18.1■□□□□ 0.49
LIME1-204ENST00000476183 WACQ9BTA9 647 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms