RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 OPN4Q9UHM6 478 aa10.38□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TRRAPQ9Y4A5 3859 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PPIAL4EA0A075B759 164 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 LOC105371242A0A075B767 164 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 A0A087WUU8 490 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PPIAL4CA0A0B4J2A2 164 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ELOVL7A1L3X0 281 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TMEM89A2RUT3 159 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CLDN25C9JDP6 229 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PPIAL4DF5H284 164 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 J3KTA2 159 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 J3QLI3 93 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 MT-ND5P03915 603 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PPIAL4FP0DN26 164 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 COX5BP10606 129 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 DRD4P21917 467 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CCNOP22674 350 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PPP1CBP62140 327 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 GLO1Q04760 184 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PSG7Q13046 419 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SCGB2A2Q13296 93 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CDK5R2Q13319 367 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 HFEQ30201 348 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SPATA46Q5T0L3 261 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ZNF774Q6NX45 483 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 C8orf82Q6P1X6 216 aaPredicted RBP10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 UNQ6126/PRO20091Q6UXV3 157 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TMPRSS11FQ6ZWK6 438 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 FAM122BQ7Z309 247 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 VTCN1Q7Z7D3 282 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 NRMQ8IXM6 262 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SLC15A3Q8IY34 581 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ALDH16A1Q8IZ83 802 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TEX29Q8N6K0 151 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PCYOX1LQ8NBM8 494 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 FAM216AQ8WUB2 273 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 RAB1CQ92928 201 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ELMOD3Q96FG2 381 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 C4orf45Q96LM5 186 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 POLE4Q9NR33 117 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CYSLTR2Q9NS75 346 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 FGFR1OP2Q9NVK5 253 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 GID8Q9NWU2 228 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PCDHB10Q9UN67 800 aa10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 POLR3KQ9Y2Y1 108 aaPredicted RBP10.37□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TRAV27A0A087WT01 109 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 A0A0G2JMP0 313 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 A0A0X1KG70 313 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 A6NIZ1 184 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CDC42EP2O14613 210 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SLC22A2O15244 555 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SPRY3O43610 288 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 AHCYL1O43865 530 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PTP4A3O75365 173 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 EPHA1P21709 976 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 MSR1P21757 451 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TUBG1P23258 451 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 GATA3P23771 443 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 GCH1P30793 250 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SLC9A3P48764 834 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 RAP1BP61224 184 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PCBD1P61457 104 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 RAP1AP62834 184 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TOP3AQ13472 1001 aaPredicted RBP10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TRAM2Q15035 370 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 MAPRE2Q15555 327 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 LRRC23Q53EV4 343 aaPredicted RBP10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CBLL1Q75N03 491 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 IGFN1Q86VF2 1251 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ICA1LQ8NDH6 482 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 OR4M2Q8NGB6 313 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 OR51A7Q8NH64 312 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ZNF418Q8TF45 676 aaPredicted RBP10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CCL17Q92583 94 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 DVL3Q92997 716 aaPredicted RBP10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TPD52L3Q96J77 140 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 DIRC2Q96SL1 478 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ELOVL3Q9HB03 270 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 CD14P08571 375 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 KITLGP21583 273 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 YAP1P46937 504 aaKnown RBP10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 SLC3A1Q07837 685 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 MTX3Q5HYI7 312 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 TBPL2Q6SJ96 375 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 Q6ZR03 302 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 MBOAT2Q6ZWT7 520 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 OAFQ86UD1 273 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ZNF283Q8N7M2 679 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ABHD4Q8TB40 342 aa10.35□□□□□ -0.75
MSH5-SAPCD1-205ENST00000476085 ACOT11Q8WXI4 607 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms