RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SIGLECL1Q8N7X8 197 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 MOSPD2Q8NHP6 518 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 DYDC1Q8WWB3 177 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 GEMIN6Q8WXD5 167 aaKnown RBP9.16□□□□□ -0.94
CDRT1-205ENST00000475944 C4orf45Q96LM5 186 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 RBP7Q96R05 134 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 ALG12Q9BV10 488 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 WNT5BQ9H1J7 359 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 ZNF696Q9H7X3 374 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 MSL2Q9HCI7 577 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 C20orf141Q9NUB4 165 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 RIMS3Q9UJD0 308 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 KLHL21Q9UJP4 597 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 PURGQ9UJV8 347 aaKnown RBP9.16□□□□□ -0.94
CDRT1-205ENST00000475944 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 AUP1Q9Y679 476 aa9.16□□□□□ -0.94
CDRT1-205ENST00000475944 KCNAB3O43448 404 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 IGHMP01871 453 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 SBK2P0C263 348 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 TNFRSF1AP19438 455 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 GSTM3P21266 225 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 PRTN3P24158 256 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 LAP3P28838 519 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 CRYBA2P53672 197 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 RPL27P61353 136 aaKnown RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 ZNF154Q13106 437 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 TOP3AQ13472 1001 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 PIN1Q13526 163 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 TUSC1Q2TAM9 212 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 TMEM155Q4W5P6 130 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 FAM205BPQ63HN1 556 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 NPEPL1Q8NDH3 523 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 DCLRE1CQ96SD1 692 aaKnown RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 SH3GL1Q99961 368 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 MRI1Q9BV20 369 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 PATZ1Q9HBE1 687 aaKnown RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 NPHS2Q9NP85 383 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 TMEM106BQ9NUM4 274 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 PLEK2Q9NYT0 353 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 NDRG4Q9ULP0 352 aaKnown RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
CDRT1-205ENST00000475944 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-205ENST00000475944 A0A1W2PPL8 197 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 HTR3EA5X5Y0 456 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 C12orf71A8MTZ7 269 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 SURF4O15260 269 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 SHOX2O60902 331 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ABHD16AO95870 558 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 NGFP01138 241 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 IFNA14P01570 189 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 COX5BP10606 129 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF12P17014 697 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 TNFRSF1BP20333 461 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 MSR1P21757 451 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 TUBG1P23258 451 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 IFNA8P32881 189 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 GZMMP51124 257 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 CDK5R2Q13319 367 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 CYLC2Q14093 348 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ESCO2Q56NI9 601 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 SPRNQ5BIV9 151 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-205ENST00000475944 NANOGP8Q6NSW7 305 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 FOXL2NBQ6ZUU3 175 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 SYT9Q86SS6 491 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF283Q8N7M2 679 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 LRRC58Q96CX6 371 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 SAMD8Q96LT4 415 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ECSITQ9BQ95 431 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 WACQ9BTA9 647 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 MMP26Q9NRE1 261 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 TUBG2Q9NRH3 451 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 MAN2C1Q9NTJ4 1040 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 DCAF16Q9NXF7 216 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF69Q9UC07 566 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 INSIG2Q9Y5U4 225 aa9.14□□□□□ -0.95
CDRT1-205ENST00000475944 A6NIZ1 184 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 A8MXK9 166 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 PIP5K1CO60331 668 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 IFI30P13284 250 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 OR1E2P47887 323 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 SLC6A9P48067 706 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 CTXN1P60606 82 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 RAP1BP61224 184 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 BTG1P62324 171 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 RAP1AP62834 184 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 IL13RA1P78552 427 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 ST3GAL3Q11203 375 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 PSG7Q13046 419 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 BAMBIQ13145 260 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 ENDOGQ14249 297 aaKnown RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 RABL3Q5HYI8 236 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 ERICH5Q6P6B1 374 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms