RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 SLCO5A1Q9H2Y9 848 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 SRPK3Q9UPE1 567 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 WIF1Q9Y5W5 379 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 TRDV1A0A1B0GX56 115 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 FEZF1A0PJY2 475 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 CALCRP30988 508 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 MC3RP41968 323 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 MTCP1P56278 107 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 WDR5P61964 334 aaKnown RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 OR7A5Q15622 319 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 LTC4SQ16873 150 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 SPRYD7Q5W111 196 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 C18orf63Q68DL7 685 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 BPIFCQ8NFQ6 507 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 OR8J2Q8NGG1 315 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 C10orf90Q96M02 699 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 OR51B6Q9H340 312 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 ZDHHC11Q9H8X9 412 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 CHEK1O14757 476 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 EIF1BO60739 113 aaKnown RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 EIF1P41567 113 aaKnown RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 PDE7AQ13946 482 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 HLXQ14774 488 aaPredicted RBP10.59□□□□□ -0.71
U2AF1-209ENST00000475639 TIGITQ495A1 244 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 SERINC2Q96SA4 455 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 KPTNQ9Y664 436 aa10.59□□□□□ -0.71
U2AF1-209ENST00000475639 SPP1P10451 314 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF684Q5T5D7 378 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 C12orf73Q69YU5 71 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 MMP21Q8N119 569 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 KCNRGQ8N5I3 272 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 M1APQ8TC57 530 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 RAB3CQ96E17 227 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 C4orf36Q96KX1 117 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 NTMT1Q9BV86 223 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 ELOVL3Q9HB03 270 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 PRAMEF27A3QJZ7 478 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 FOLR1P15328 257 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SYN1P17600 705 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 PRAMEF9Q5VWM5 478 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 RPL22L1Q6P5R6 122 aaKnown RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 Q6ZTK2 550 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SLC16A13Q7RTY0 426 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 ASB11Q8WXH4 323 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 WDR89Q96FK6 387 aaPredicted RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 NINQ8N4C6 2090 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 UTRNP46939 3433 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 CCDC88CQ9P219 2028 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 TERTO14746 1132 aaKnown RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 TGOLN2O43493 480 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 YIF1AO95070 293 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 DEFA4P12838 97 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SELLP14151 372 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 GIPRP48546 466 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 KCNJ3P48549 501 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SLC11A1P49279 550 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 GAS1P54826 345 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 ARG2P78540 354 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 TMEM184AQ6ZMB5 413 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 LINC01465Q8N7H1 131 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 OR10G3Q8NGC4 313 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 PIPOXQ9P0Z9 390 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 TRBV23-1A0A0A0MS06 115 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 MRPL33O75394 65 aaKnown RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SOD2P04179 222 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SLC1A3P43003 542 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 H3F3CQ6NXT2 135 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 OPN5Q6U736 354 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 C5orf46Q6UWT4 87 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SIAH3Q8IW03 269 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 LGI3Q8N145 548 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 C11orf42Q8N5U0 333 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 OR6S1Q8NH40 331 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 SEH1LQ96EE3 360 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 GPR62Q9BZJ7 368 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 EXOSC3Q9NQT5 275 aaKnown RBP10.58□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF281Q9Y2X9 895 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 URGCP-MRPS24S4R325 110 aa10.58□□□□□ -0.72
U2AF1-209ENST00000475639 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 TO15178 435 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SPI1P17947 270 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 S100A11P31949 105 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 FCRLBQ6BAA4 426 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SLC16A14Q7RTX9 510 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 OVCH1Q7RTY7 1134 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 GPR26Q8NDV2 337 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 PXT1Q8NFP0 134 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms