RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CLHC1Q8NHS4 586 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 CAPSLQ8WWF8 208 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 NRIP2Q9BQI9 281 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 MRPL45Q9BRJ2 306 aaKnown RBP3.83□□□□□ -1.8
SMC5-203ENST00000475540 UCK2Q9BZX2 261 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 ACTR3CQ9C0K3 210 aaPredicted RBP3.83□□□□□ -1.8
SMC5-203ENST00000475540 PIGUQ9H490 435 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 NTN4Q9HB63 628 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 PLGRKTQ9HBL7 147 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 GIN1Q9NXP7 522 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 TREM2Q9NZC2 230 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 MTRF1LQ9UGC7 380 aaKnown RBP3.83□□□□□ -1.8
SMC5-203ENST00000475540 CD300AQ9UGN4 299 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 LSM7Q9UK45 103 aaKnown RBP3.83□□□□□ -1.8
SMC5-203ENST00000475540 STAP1Q9ULZ2 295 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 DDX19BQ9UMR2 479 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 ASF1AQ9Y294 204 aa3.83□□□□□ -1.8
SMC5-203ENST00000475540 FANCIQ9NVI1 1328 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 A0A0G2JRQ6 117 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 H7C0C1 242 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 SIVA1O15304 175 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 WISP3O95389 354 aaPredicted RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 IGHV2-5P01817 119 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 FGGP02679 453 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 PCCAP05165 728 aaPredicted RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 KLK3P07288 261 aaPredicted RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 TBPP20226 339 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 GSSP48637 474 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 SSR4P51571 173 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 TRDNQ13061 729 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 C16orf72Q14CZ0 275 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 CASC10Q5T4H9 136 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 C6orf183Q5T699 404 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 CMC1Q7Z7K0 106 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 LINC01551Q86U37 167 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 ARHGAP18Q8N392 663 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 EID2Q8N6I1 236 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 CXorf40AQ8TE69 158 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMC5-203ENST00000475540 FGF11Q92914 225 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 FAM131CQ96AQ9 280 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 RPUSD4Q96CM3 377 aaKnown RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 RASL11BQ9BPW5 248 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 KCTD14Q9BQ13 255 aaPredicted RBP3.82□□□□□ -1.8
SMC5-203ENST00000475540 SLC17A9Q9BYT1 436 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 GBA3Q9H227 469 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 HRASLS2Q9NWW9 162 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 PSG11Q9UQ72 335 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 KPTNQ9Y664 436 aa3.82□□□□□ -1.8
SMC5-203ENST00000475540 RAB19A4D1S5 217 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 CENPXA8MT69 81 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 IQCF5A8MTL0 148 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 TMX2-CTNND1H3BSU7 103 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 CDC7O00311 574 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 ZBTB5O15062 677 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 EEDO75530 441 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 CLIC3O95833 236 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 CCL2P13500 99 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 PMCHP20382 165 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 GPR1P46091 355 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 PSMC5P62195 406 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 NSUN5P1Q3KNT7 163 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 MARCH8Q5T0T0 291 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 TRIM40Q6P9F5 258 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 ERO1BQ86YB8 467 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 RBM45Q8IUH3 476 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 PNKDQ8N490 385 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 FAM86B1Q8N7N1 296 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 SLC7A13Q8TCU3 470 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 PDCD6IPQ8WUM4 868 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 CMTM7Q96FZ5 175 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 FAM210BQ96KR6 192 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 GLT1D1Q96MS3 346 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 TRNT1Q96Q11 434 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 KLHDC3Q9BQ90 382 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 ECSITQ9BQ95 431 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 TMEM246Q9BRR3 403 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 RAB1BQ9H0U4 201 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 NEUROG2Q9H2A3 272 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 OR52A5Q9H2C5 316 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 CSNK1G1Q9HCP0 422 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 MRPL47Q9HD33 250 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 ZNF302Q9NR11 478 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 CCDC59Q9P031 241 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 CTSFQ9UBX1 484 aa3.81□□□□□ -1.8
SMC5-203ENST00000475540 NUFIP1Q9UHK0 495 aaKnown RBP3.81□□□□□ -1.8
SMC5-203ENST00000475540 MRPS12O15235 138 aaKnown RBP3.8□□□□□ -1.8
SMC5-203ENST00000475540 MBTPS2O43462 519 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 MGRN1O60291 552 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 ETHE1O95571 254 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 CD160O95971 181 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 LCN1P31025 176 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 SHMT2P34897 504 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 BIDP55957 195 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 ZNF33AQ06730 810 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 CCDC122Q5T0U0 273 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 GPRC6AQ5T6X5 926 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms