RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 HINT3Q9NQE9 182 aaKnown RBP17.59■□□□□ 0.41
SNX13-206ENST00000474067 POLE4Q9NR33 117 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 ARL8BQ9NVJ2 186 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 TAAR3PQ9P1P4 343 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 ACTR3BQ9P1U1 418 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 ADAM21Q9UKJ8 722 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 V9GYQ6 96 aa17.59■□□□□ 0.41
SNX13-206ENST00000474067 PTP4A3O75365 173 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 IGHV4-31P0DP07 118 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 TMEM33P57088 247 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 LSM6P62312 80 aaKnown RBP17.58■□□□□ 0.4
SNX13-206ENST00000474067 PSG4Q00888 419 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 FHL1Q13642 323 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 JAZF1Q86VZ6 243 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 ZDHHC21Q8IVQ6 265 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 GLB1L2Q8IW92 636 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 FANK1Q8TC84 345 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 Q96M85 177 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 ADAM18Q9Y3Q7 739 aa17.58■□□□□ 0.4
SNX13-206ENST00000474067 NSD1Q96L73 2696 aaPredicted RBP17.57■□□□□ 0.4
SNX13-206ENST00000474067 CSPG4Q6UVK1 2322 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 NF1P21359 2839 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 IGKV1D-43A0A0B4J1Z2 117 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 TRBV4-1A0A0J9YWV2 114 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 C17orf100A8MU93 164 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 IDH3BO43837 385 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 LMX1BO60663 402 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 ICMTO60725 284 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 TXNDC12O95881 172 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 RENP00797 406 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 SEMG1P04279 462 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 TACSTD2P09758 323 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 CCL2P13500 99 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 HOXB6P17509 224 aaKnown RBP17.57■□□□□ 0.4
SNX13-206ENST00000474067 GSTM3P21266 225 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 FPR3P25089 353 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 NOS3P29474 1203 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 RRM2P31350 389 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 ALDH3B1P43353 468 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 MESTQ5EB52 335 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 TSEN54Q7Z6J9 526 aaKnown RBP17.57■□□□□ 0.4
SNX13-206ENST00000474067 SNX18Q96RF0 628 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 DIRC2Q96SL1 478 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 BEX2Q9BXY8 128 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 SHARPINQ9H0F6 387 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 DECR2Q9NUI1 292 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 VSX1Q9NZR4 365 aaPredicted RBP17.57■□□□□ 0.4
SNX13-206ENST00000474067 ATPIF1Q9UII2 106 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 PRPF19Q9UMS4 504 aaKnown RBP17.57■□□□□ 0.4
SNX13-206ENST00000474067 POLR1DQ9Y2S0 133 aa17.57■□□□□ 0.4
SNX13-206ENST00000474067 CHD3Q12873 2000 aaKnown RBP17.56■□□□□ 0.4
SNX13-206ENST00000474067 LOC100289279A0A1B0GTE1 492 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 B2RBV5 119 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 J3QW42 95 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 SLC16A7O60669 478 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 DIRAS1O95057 198 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 IGHV3-13P01766 116 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 GPR6P46095 362 aaPredicted RBP17.56■□□□□ 0.4
SNX13-206ENST00000474067 MEX3DQ86XN8 651 aaKnown RBP17.56■□□□□ 0.4
SNX13-206ENST00000474067 FAM86B1Q8N7N1 296 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 OR52L1Q8NGH7 329 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 AKR7LQ8NHP1 331 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 GNPDA2Q8TDQ7 276 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 C4orf45Q96LM5 186 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 SYT4Q9H2B2 425 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 OR51B6Q9H340 312 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 MAGIXQ9H6Y5 334 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 FZR1Q9UM11 496 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 IER3IP1Q9Y5U9 82 aa17.56■□□□□ 0.4
SNX13-206ENST00000474067 ARPC3O15145 178 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 TPD52L2O43399 206 aaKnown RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 SGCEO43556 437 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 DOK2O60496 412 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 ABHD16AO95870 558 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 RIN1Q13671 783 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 GK3PQ14409 553 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 RFX4Q33E94 735 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 MBNL2Q5VZF2 373 aaKnown RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 ZCCHC24Q8N2G6 241 aaKnown RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 PAQR4Q8N4S7 273 aaPredicted RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 ERMAPQ96PL5 475 aaPredicted RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 DCLRE1CQ96SD1 692 aaKnown RBP17.55■□□□□ 0.4
SNX13-206ENST00000474067 TRIM15Q9C019 465 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 EGLN1Q9GZT9 426 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 WNT5BQ9H1J7 359 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 TBCCD1Q9NVR7 557 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 PLEK2Q9NYT0 353 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 ABCA1O95477 2261 aa17.55■□□□□ 0.4
SNX13-206ENST00000474067 IGHV4-61A0A0C4DH41 118 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 H7C1C5 153 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 SOCS2O14508 198 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 FAM157CP0CG43 387 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 NAT2P11245 290 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 ZNF16P17020 682 aaPredicted RBP17.54■□□□□ 0.4
SNX13-206ENST00000474067 HTR5AP47898 357 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 RGS6P49758 472 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 LCN6P62502 163 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 GLO1Q04760 184 aa17.54■□□□□ 0.4
SNX13-206ENST00000474067 TSPAN31Q12999 210 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms