RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TSSK2Q96PF2 358 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 ZNF416Q9BWM5 594 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 GSX2Q9BZM3 304 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OR2H1Q9GZK4 316 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 RACGAP1Q9H0H5 632 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 PAPOLBQ9NRJ5 636 aaKnown RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 FBXO9Q9UK97 447 aaPredicted RBP11.91□□□□□ -0.5
USF1-205ENST00000473969 TACC2O95359 2948 aa11.91□□□□□ -0.5
USF1-205ENST00000473969 OR6C68A6NDL8 312 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 B9A039 149 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 HMGN1P05114 100 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 OR4A8P0C604 315 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 ZNF35P13682 527 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 ZNF823P16415 610 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 GRK5P34947 590 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 THBS4P35443 961 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 RAD52P43351 418 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 SELENOVP59797 346 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 SNRPD2P62316 118 aaKnown RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 PSG4Q00888 419 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 HGFACQ04756 655 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 AQP6Q13520 282 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 ENDOGQ14249 297 aaKnown RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 RAB35Q15286 201 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 ARL9Q6T311 187 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 CYB561A3Q8NBI2 242 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 OR2AJ1Q8NGZ0 328 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 AKR7LQ8NHP1 331 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 C11orf40Q8WZ69 217 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 CENPNQ96H22 339 aaPredicted RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 PLEKHA8Q96JA3 519 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 FN3KQ9H479 309 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 NTN4Q9HB63 628 aa11.9□□□□□ -0.5
USF1-205ENST00000473969 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
USF1-205ENST00000473969 ROS1P08922 2347 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CADP27708 2225 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 C5orf49A4QMS7 147 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 OVOL3O00110 214 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 SGCEO43556 437 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 MPZL1O95297 269 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CD8AP01732 235 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 SCG5P05408 212 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CCL2P13500 99 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 GLRXP35754 106 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CDKN1AP38936 164 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 TEKQ02763 1124 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 GINS1Q14691 196 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ZNF774Q6NX45 483 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ZBTB46Q86UZ6 589 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ZNF584Q8IVC4 421 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ICA1LQ8NDH6 482 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CPEB3Q8NE35 698 aaKnown RBP11.89□□□□□ -0.51
USF1-205ENST00000473969 GJC3Q8NFK1 279 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 CACNG6Q9BXT2 260 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 SEMA6AQ9H2E6 1030 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
USF1-205ENST00000473969 KRT84Q9NSB2 600 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ZNF701Q9NV72 531 aaPredicted RBP11.89□□□□□ -0.51
USF1-205ENST00000473969 PLEK2Q9NYT0 353 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ASH2LQ9UBL3 628 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 ENOPH1Q9UHY7 261 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 HEATR1Q9H583 2144 aaKnown RBP11.89□□□□□ -0.51
USF1-205ENST00000473969 LRBAP50851 2863 aa11.89□□□□□ -0.51
USF1-205ENST00000473969 PDZD2O15018 2839 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 DSCAMO60469 2012 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 DCTN6O00399 190 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 DOK2O60496 412 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 SNAP29O95721 258 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 TP53P04637 393 aaPredicted RBP11.88□□□□□ -0.51
USF1-205ENST00000473969 LCKP06239 509 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
USF1-205ENST00000473969 FAM157BP0CG42 384 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 COX5BP10606 129 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 PAX1P15863 534 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 PCSK6P29122 969 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 FMO3P31513 532 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 PYCR1P32322 319 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 HTR5AP47898 357 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 BLVRAP53004 296 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 UCP2P55851 309 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 CRMP1Q14194 572 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 TESK1Q15569 626 aa11.88□□□□□ -0.51
USF1-205ENST00000473969 ADIPOQQ15848 244 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms