RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 KRTAP1-3Q8IUG1 177 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 OR6V1Q8N148 313 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 PAQR4Q8N4S7 273 aaPredicted RBP11.36□□□□□ -0.59
TPM3-216ENST00000473036 IQCF1Q8N6M8 205 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 NPEPL1Q8NDH3 523 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 ZNF555Q8NEP9 628 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 RBP7Q96R05 134 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 FN3KQ9H479 309 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 Q9H521 79 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 EMC7Q9NPA0 242 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 SMPD3Q9NY59 655 aaPredicted RBP11.36□□□□□ -0.59
TPM3-216ENST00000473036 CISD1Q9NZ45 108 aaKnown RBP11.36□□□□□ -0.59
TPM3-216ENST00000473036 STAB1Q9NY15 2570 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 IGLV1-36A0A0B4J1U3 117 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 IGHV2OR16-5A0A0B4J2B6 119 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 AHCYL1O43865 530 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 SLC16A7O60669 478 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 ZNF35P13682 527 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 PEX2P28328 305 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 ARR3P36575 388 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 DAPP51397 102 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 ZNF84P51523 738 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 NPRL3Q12980 569 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 SGCAQ16586 387 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 LRRC36Q1X8D7 754 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 SLC36A3Q495N2 470 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 NRN1LQ496H8 165 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 FAM27BQ5VT28 67 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 LEG1Q6P5S2 330 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 SLC22A25Q6T423 547 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 SLC16A14Q7RTX9 510 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
TPM3-216ENST00000473036 SDR9C7Q8NEX9 313 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 TEX47Q8TBZ9 253 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 ZNF416Q9BWM5 594 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 TSSK6Q9BXA6 273 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 POLE4Q9NR33 117 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 B9D1Q9UPM9 204 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 COA3Q9Y2R0 106 aaPredicted RBP11.35□□□□□ -0.59
TPM3-216ENST00000473036 CSPG4Q6UVK1 2322 aa11.35□□□□□ -0.59
TPM3-216ENST00000473036 FN1P02751 2386 aaKnown RBP11.34□□□□□ -0.59
TPM3-216ENST00000473036 ATRQ13535 2644 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 A0A1W2PPL8 197 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 H0YAE9 185 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 H3BN98 237 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 XKRYO14609 159 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 UBL3O95164 117 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 HMGN1P05114 100 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 GAAP10253 952 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 PSKH1P11801 424 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 CCL2P13500 99 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 ZNF32P17041 273 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 NKX6-1P78426 367 aaPredicted RBP11.34□□□□□ -0.59
TPM3-216ENST00000473036 PSG4Q00888 419 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM3-216ENST00000473036 IL18R1Q13478 541 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 MST1LQ2TV78 715 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 ACSM5Q6NUN0 579 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 ADCK1Q86TW2 530 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 CCDC36Q8IYA8 594 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 LNX2Q8N448 690 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 DHRSXQ8N5I4 330 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 OR2T33Q8NG76 320 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 OR52E2Q8NGJ4 325 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 SMAP2Q8WU79 429 aaPredicted RBP11.34□□□□□ -0.59
TPM3-216ENST00000473036 FBXW5Q969U6 566 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 GABARAPL3Q9BY60 117 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 SRA1Q9HD15 236 aaKnown RBP11.34□□□□□ -0.59
TPM3-216ENST00000473036 LAMP3Q9UQV4 416 aa11.34□□□□□ -0.59
TPM3-216ENST00000473036 OVOL3O00110 214 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 MPZL2O60487 215 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 MITFO75030 526 aaPredicted RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 TFP02787 698 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 SERPINA5P05154 406 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 CST2P09228 141 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 CLUP10909 449 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 NR2C1P13056 603 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 NPR2P20594 1047 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 NOS3P29474 1203 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 CRISP1P54107 249 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 MEP1BQ16820 701 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 SLC27A4Q6P1M0 643 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 ZBTB46Q86UZ6 589 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 DEPDC4Q8N2C3 294 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 SLC37A3Q8NCC5 494 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 AKR7LQ8NHP1 331 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 TRUB1Q8WWH5 349 aaKnown RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 C11orf40Q8WZ69 217 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms