RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SHC3Q92529 594 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 KIFAP3Q92845 792 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 CCDC126Q96EE4 140 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 PARP12Q9H0J9 701 aaKnown RBP3.03□□□□□ -1.92
CLK1-209ENST00000472679 GPATCH2LQ9NWQ4 482 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 WIF1Q9Y5W5 379 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 GLYATL1P3A0A0U1RQE8 302 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 C7orf66A4D0T2 115 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 RAB29O14966 203 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 GCM2O75603 506 aaPredicted RBP3.02□□□□□ -1.93
CLK1-209ENST00000472679 MPZL1O95297 269 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 CRYGBP07316 175 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 UBTFL6P0CB48 400 aaPredicted RBP3.02□□□□□ -1.93
CLK1-209ENST00000472679 OR5H8P0DN80 308 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 ZNF14P17017 642 aaPredicted RBP3.02□□□□□ -1.93
CLK1-209ENST00000472679 COX19Q49B96 90 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 SLC25A34Q6PIV7 304 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 C15orf40Q8WUR7 153 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 OR10C1Q96KK4 312 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 SLC29A1Q99808 456 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 TMED5Q9Y3A6 229 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 TUBGCP6Q96RT7 1819 aa3.02□□□□□ -1.93
CLK1-209ENST00000472679 CCNKO75909 580 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 SERPINA5P05154 406 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 UQCRFS1P1P0C7P4 283 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 TNNI1P19237 187 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 RAB3BP20337 219 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 GPX4P36969 197 aaPredicted RBP3.01□□□□□ -1.93
CLK1-209ENST00000472679 TMED10P49755 219 aaKnown RBP3.01□□□□□ -1.93
CLK1-209ENST00000472679 SNRNP35Q16560 246 aaKnown RBP3.01□□□□□ -1.93
CLK1-209ENST00000472679 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 METTL21CQ5VZV1 264 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 FAM228AQ86W67 206 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 SLC22A9Q8IVM8 553 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 RGP1Q92546 391 aaPredicted RBP3.01□□□□□ -1.93
CLK1-209ENST00000472679 CNDP1Q96KN2 507 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 OR5B12Q96R08 314 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 ZNF382Q96SR6 550 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 NEUROG2Q9H2A3 272 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 OR51M1Q9H341 326 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 CTSFQ9UBX1 484 aa3.01□□□□□ -1.93
CLK1-209ENST00000472679 MAPK8IP3Q9UPT6 1336 aa3□□□□□ -1.93
CLK1-209ENST00000472679 IGLV1-36A0A0B4J1U3 117 aa3□□□□□ -1.93
CLK1-209ENST00000472679 PALMO75781 387 aa3□□□□□ -1.93
CLK1-209ENST00000472679 ANXA5P08758 320 aa3□□□□□ -1.93
CLK1-209ENST00000472679 OR56A5P0C7T3 313 aa3□□□□□ -1.93
CLK1-209ENST00000472679 CCNB1P14635 433 aa3□□□□□ -1.93
CLK1-209ENST00000472679 PTMSP20962 102 aa3□□□□□ -1.93
CLK1-209ENST00000472679 CEACAM3P40198 252 aa3□□□□□ -1.93
CLK1-209ENST00000472679 CX3CR1P49238 355 aa3□□□□□ -1.93
CLK1-209ENST00000472679 RCAN2Q14206 197 aa3□□□□□ -1.93
CLK1-209ENST00000472679 SSX2Q16385 188 aa3□□□□□ -1.93
CLK1-209ENST00000472679 SMUG1Q53HV7 270 aa3□□□□□ -1.93
CLK1-209ENST00000472679 SAXO2Q658L1 398 aa3□□□□□ -1.93
CLK1-209ENST00000472679 PRSS58Q8IYP2 241 aa3□□□□□ -1.93
CLK1-209ENST00000472679 OR8U1Q8NH10 309 aa3□□□□□ -1.93
CLK1-209ENST00000472679 SLC2A14Q8TDB8 520 aa3□□□□□ -1.93
CLK1-209ENST00000472679 RNF139Q8WU17 664 aa3□□□□□ -1.93
CLK1-209ENST00000472679 MRGPRFQ96AM1 343 aa3□□□□□ -1.93
CLK1-209ENST00000472679 RMI2Q96E14 147 aa3□□□□□ -1.93
CLK1-209ENST00000472679 NARS2Q96I59 477 aaKnown RBP3□□□□□ -1.93
CLK1-209ENST00000472679 RACGAP1Q9H0H5 632 aa3□□□□□ -1.93
CLK1-209ENST00000472679 SPNS1Q9H2V7 528 aa3□□□□□ -1.93
CLK1-209ENST00000472679 ZDHHC4Q9NPG8 344 aa3□□□□□ -1.93
CLK1-209ENST00000472679 MARCOQ9UEW3 520 aaPredicted RBP3□□□□□ -1.93
CLK1-209ENST00000472679 GPR179Q6PRD1 2367 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 BRWD3Q6RI45 1802 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 IGKV1D-17A0A075B6S4 117 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 TRAV40A0A0B4J280 105 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 A0A0U1RQV1 116 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 H0Y8G0 127 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 RCBTB2O95199 551 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 CELP19835 753 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 NAA10P41227 235 aaPredicted RBP2.99□□□□□ -1.93
CLK1-209ENST00000472679 KIR3DL2P43630 455 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 SULT1E1P49888 294 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 ACLYP53396 1101 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 CDH17Q12864 832 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 CHRFAM7AQ494W8 412 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 THEM4Q5T1C6 240 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 LYPD1Q8N2G4 141 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 OSR2Q8N2R0 312 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 PRELID2Q8N945 189 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 OR52P1PQ8NH57 321 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 AKR7LQ8NHP1 331 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 COQ8AQ8NI60 647 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 SEH1LQ96EE3 360 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 FOXC2Q99958 501 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 FAM49BQ9NUQ9 324 aa2.99□□□□□ -1.93
CLK1-209ENST00000472679 TSSC4Q9Y5U2 329 aaPredicted RBP2.99□□□□□ -1.93
CLK1-209ENST00000472679 DOCK8Q8NF50 2099 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 RPL36A-HNRNPH2H7BZ11 118 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 NUPL2O15504 423 aaKnown RBP2.98□□□□□ -1.93
CLK1-209ENST00000472679 APCSP02743 223 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 DCNP07585 359 aaKnown RBP2.98□□□□□ -1.93
CLK1-209ENST00000472679 SLC11A1P49279 550 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 CACNG7P62955 275 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 ADARB1P78563 741 aaKnown RBP2.98□□□□□ -1.93
CLK1-209ENST00000472679 IRF4Q15306 451 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms