RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 SIGLEC1Q9BZZ2 1709 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 EFCAB5A4FU69 1503 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 ZFYVE16Q7Z3T8 1539 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 ARHGEF12Q9NZN5 1544 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 BRWD3Q6RI45 1802 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 A0A1W2PPE3 182 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 ZNF233A6NK53 670 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 TMEM50AO95807 157 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 CT62P0C5K7 136 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 UBTFL6P0CB48 400 aaPredicted RBP3.36□□□□□ -1.87
SGCE-210ENST00000472326 SLC11A1P49279 550 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 ACTG2P63267 376 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 PITPNAQ00169 270 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 IL24Q13007 206 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 CLINT1Q14677 625 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 PON2Q15165 354 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 SMUG1Q53HV7 270 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 SAXO2Q658L1 398 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 PLET1Q6UQ28 207 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 NECAP1Q8NC96 275 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
SGCE-210ENST00000472326 ROPN1BQ9BZX4 212 aaPredicted RBP3.36□□□□□ -1.87
SGCE-210ENST00000472326 NT5MQ9NPB1 228 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 CTSFQ9UBX1 484 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 NPTNQ9Y639 398 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 LRP5O75197 1615 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 ALKQ9UM73 1620 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 GPR179Q6PRD1 2367 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 TRAPPC8Q9Y2L5 1435 aa3.36□□□□□ -1.87
SGCE-210ENST00000472326 DENND4BO75064 1496 aaPredicted RBP3.35□□□□□ -1.87
SGCE-210ENST00000472326 NEO1Q92859 1461 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 SHANK2Q9UPX8 1470 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 CEP350Q5VT06 3117 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 TUBGCP6Q96RT7 1819 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 CEBPDP49716 269 aaPredicted RBP3.35□□□□□ -1.87
SGCE-210ENST00000472326 C1QTNF8P60827 252 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 GPM6BQ13491 265 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 ANKRD22Q5VYY1 191 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 TEX9Q8N6V9 391 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 C15orf40Q8WUR7 153 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 NPY6RQ99463 290 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 SAV1Q9H4B6 383 aaPredicted RBP3.35□□□□□ -1.87
SGCE-210ENST00000472326 KCNJ16Q9NPI9 418 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 C3P01024 1663 aa3.35□□□□□ -1.87
SGCE-210ENST00000472326 WRNQ14191 1432 aaPredicted RBP eCLIP3.35□□□□□ -1.87
SGCE-210ENST00000472326 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
SGCE-210ENST00000472326 GPX6P59796 221 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 ZNF816Q0VGE8 651 aaPredicted RBP3.34□□□□□ -1.87
SGCE-210ENST00000472326 ECH1Q13011 328 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 SF3A2Q15428 464 aaKnown RBP3.34□□□□□ -1.87
SGCE-210ENST00000472326 TMEM205Q6UW68 189 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 TGIF2LXQ8IUE1 241 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 PRSS58Q8IYP2 241 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 OR8J1Q8NGP2 316 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 COQ8AQ8NI60 647 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 CWH43Q9H720 699 aa3.34□□□□□ -1.87
SGCE-210ENST00000472326 COL27A1Q8IZC6 1860 aaPredicted RBP3.34□□□□□ -1.87
SGCE-210ENST00000472326 CNTNAP1P78357 1384 aa3.34□□□□□ -1.88
SGCE-210ENST00000472326 ADAMTS13Q76LX8 1427 aa3.34□□□□□ -1.88
SGCE-210ENST00000472326 CDK12Q9NYV4 1490 aaPredicted RBP3.34□□□□□ -1.88
SGCE-210ENST00000472326 RNF17Q9BXT8 1623 aaKnown RBP3.33□□□□□ -1.88
SGCE-210ENST00000472326 RICTORQ6R327 1708 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 ZNF850A8MQ14 1090 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 PTMAP06454 111 aaKnown RBP3.33□□□□□ -1.88
SGCE-210ENST00000472326 ZNF806P0C7X5 589 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 AQP2P41181 271 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 C6orf226Q5I0X4 101 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 CCNJQ5T5M9 372 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 BHLHA15Q7RTS1 189 aaPredicted RBP3.33□□□□□ -1.88
SGCE-210ENST00000472326 BHLHE23Q8NDY6 225 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 OR8U1Q8NH10 309 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 RNF157Q96PX1 679 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 DOK1Q99704 481 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 SLC39A3Q9BRY0 314 aa3.33□□□□□ -1.88
SGCE-210ENST00000472326 PARP12Q9H0J9 701 aaKnown RBP3.33□□□□□ -1.88
SGCE-210ENST00000472326 OR52A4PA6NMU1 304 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 A8MUU9 505 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 DPM1O60762 260 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 KITLGP21583 273 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 OPRK1P41145 380 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 TPMTP51580 245 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 GBX2P52951 348 aaPredicted RBP3.32□□□□□ -1.88
SGCE-210ENST00000472326 FBXW12Q6X9E4 464 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 EID2Q8N6I1 236 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 RHEBL1Q8TAI7 183 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 CXorf40AQ8TE69 158 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 IKBKGQ9Y6K9 419 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 FHOD3Q2V2M9 1422 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 C9orf84Q5VXU9 1444 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 TCOF1Q13428 1488 aaKnown RBP3.32□□□□□ -1.88
SGCE-210ENST00000472326 MAGI2Q86UL8 1455 aa3.32□□□□□ -1.88
SGCE-210ENST00000472326 HIVEP2P31629 2446 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 ABCA9Q8IUA7 1624 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 ZMYM4Q5VZL5 1548 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 RAPGEF2Q9Y4G8 1499 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 RGS12O14924 1447 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 JCADQ9P266 1359 aa3.31□□□□□ -1.88
SGCE-210ENST00000472326 CLRN2A0PK11 232 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms