RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TFPTP0C1Z6 253 aa2.55□□□□□ -2
CD46-213ENST00000471987 NPIPA8P0DM63 369 aa2.55□□□□□ -2
CD46-213ENST00000471987 ZNF7P17097 686 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 PSMC3P17980 439 aa2.55□□□□□ -2
CD46-213ENST00000471987 PCK1P35558 622 aa2.55□□□□□ -2
CD46-213ENST00000471987 NUDT1P36639 197 aa2.55□□□□□ -2
CD46-213ENST00000471987 TGFBR2P37173 567 aa2.55□□□□□ -2
CD46-213ENST00000471987 CCR8P51685 355 aa2.55□□□□□ -2
CD46-213ENST00000471987 SEC61GP60059 68 aa2.55□□□□□ -2
CD46-213ENST00000471987 HERVK_113P61574 105 aa2.55□□□□□ -2
CD46-213ENST00000471987 CCZ1BP86790 482 aa2.55□□□□□ -2
CD46-213ENST00000471987 CCZ1P86791 482 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 PITPNAQ00169 270 aa2.55□□□□□ -2
CD46-213ENST00000471987 PAX5Q02548 391 aa2.55□□□□□ -2
CD46-213ENST00000471987 IRF8Q02556 426 aa2.55□□□□□ -2
CD46-213ENST00000471987 C2orf54Q08AI8 447 aa2.55□□□□□ -2
CD46-213ENST00000471987 EIF3AQ14152 1382 aaKnown RBP2.55□□□□□ -2
CD46-213ENST00000471987 FLOT2Q14254 428 aa2.55□□□□□ -2
CD46-213ENST00000471987 RAB35Q15286 201 aa2.55□□□□□ -2
CD46-213ENST00000471987 ZNHIT3Q15649 155 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 SLC15A2Q16348 729 aa2.55□□□□□ -2
CD46-213ENST00000471987 GUK1Q16774 197 aa2.55□□□□□ -2
CD46-213ENST00000471987 IMPG1Q17R60 797 aa2.55□□□□□ -2
CD46-213ENST00000471987 ZNF699Q32M78 642 aa2.55□□□□□ -2
CD46-213ENST00000471987 ERICH3Q5RHP9 1530 aa2.55□□□□□ -2
CD46-213ENST00000471987 AK9Q5TCS8 1911 aa2.55□□□□□ -2
CD46-213ENST00000471987 GPR107Q5VW38 600 aa2.55□□□□□ -2
CD46-213ENST00000471987 ZNF518AQ6AHZ1 1483 aa2.55□□□□□ -2
CD46-213ENST00000471987 RNASEKQ6P5S7 137 aaKnown RBP2.55□□□□□ -2
CD46-213ENST00000471987 CBLN3Q6UW01 205 aa2.55□□□□□ -2
CD46-213ENST00000471987 FAM159AQ6UWV7 190 aa2.55□□□□□ -2
CD46-213ENST00000471987 C4orf22Q6V702 233 aa2.55□□□□□ -2
CD46-213ENST00000471987 NIPA1Q7RTP0 329 aa2.55□□□□□ -2
CD46-213ENST00000471987 ERASQ7Z444 233 aa2.55□□□□□ -2
CD46-213ENST00000471987 P4HA3Q7Z4N8 544 aa2.55□□□□□ -2
CD46-213ENST00000471987 RIMS1Q86UR5 1692 aaKnown RBP2.55□□□□□ -2
CD46-213ENST00000471987 PLA2G4DQ86XP0 818 aa2.55□□□□□ -2
CD46-213ENST00000471987 VSTM4Q8IW00 320 aa2.55□□□□□ -2
CD46-213ENST00000471987 BBS7Q8IWZ6 715 aa2.55□□□□□ -2
CD46-213ENST00000471987 PDIK1LQ8N165 341 aa2.55□□□□□ -2
CD46-213ENST00000471987 GABRG1Q8N1C3 465 aa2.55□□□□□ -2
CD46-213ENST00000471987 C12orf29Q8N999 325 aa2.55□□□□□ -2
CD46-213ENST00000471987 FAM83FQ8NEG4 500 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 OR2V1Q8NHB1 315 aa2.55□□□□□ -2
CD46-213ENST00000471987 LHFPL5Q8TAF8 219 aa2.55□□□□□ -2
CD46-213ENST00000471987 M1APQ8TC57 530 aa2.55□□□□□ -2
CD46-213ENST00000471987 ACTL9Q8TC94 416 aa2.55□□□□□ -2
CD46-213ENST00000471987 PNPT1Q8TCS8 783 aaKnown RBP2.55□□□□□ -2
CD46-213ENST00000471987 TCP10LQ8TDR4 215 aa2.55□□□□□ -2
CD46-213ENST00000471987 RB1CC1Q8TDY2 1594 aa2.55□□□□□ -2
CD46-213ENST00000471987 FAM172AQ8WUF8 416 aa2.55□□□□□ -2
CD46-213ENST00000471987 SMARCD2Q92925 531 aa2.55□□□□□ -2
CD46-213ENST00000471987 BORCS5Q969J3 196 aa2.55□□□□□ -2
CD46-213ENST00000471987 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 VPS35Q96QK1 796 aa2.55□□□□□ -2
CD46-213ENST00000471987 TEAD3Q99594 435 aa2.55□□□□□ -2
CD46-213ENST00000471987 SLC30A2Q9BRI3 323 aa2.55□□□□□ -2
CD46-213ENST00000471987 C20orf24Q9BUV8 137 aa2.55□□□□□ -2
CD46-213ENST00000471987 TEKT3Q9BXF9 490 aa2.55□□□□□ -2
CD46-213ENST00000471987 SRRQ9GZT4 340 aa2.55□□□□□ -2
CD46-213ENST00000471987 METTL9Q9H1A3 318 aa2.55□□□□□ -2
CD46-213ENST00000471987 C11orf49Q9H6J7 331 aa2.55□□□□□ -2
CD46-213ENST00000471987 CALHM2Q9HA72 323 aa2.55□□□□□ -2
CD46-213ENST00000471987 CD209Q9NNX6 404 aa2.55□□□□□ -2
CD46-213ENST00000471987 MYOZ1Q9NP98 299 aaPredicted RBP2.55□□□□□ -2
CD46-213ENST00000471987 XPNPEP1Q9NQW7 623 aa2.55□□□□□ -2
CD46-213ENST00000471987 DYRK4Q9NR20 520 aa2.55□□□□□ -2
CD46-213ENST00000471987 TAS2R9Q9NYW1 312 aa2.55□□□□□ -2
CD46-213ENST00000471987 SLC22A13Q9Y226 551 aa2.55□□□□□ -2
CD46-213ENST00000471987 PIGLQ9Y2B2 252 aa2.55□□□□□ -2
CD46-213ENST00000471987 NISCHQ9Y2I1 1504 aa2.55□□□□□ -2
CD46-213ENST00000471987 STARD10Q9Y365 291 aa2.55□□□□□ -2
CD46-213ENST00000471987 FKBP7Q9Y680 259 aa2.55□□□□□ -2
CD46-213ENST00000471987 URGCP-MRPS24S4R325 110 aa2.55□□□□□ -2
CD46-213ENST00000471987 KDM5BQ9UGL1 1544 aa2.54□□□□□ -2
CD46-213ENST00000471987 ERBINQ96RT1 1412 aa2.54□□□□□ -2
CD46-213ENST00000471987 RFX7Q2KHR2 1363 aa2.54□□□□□ -2
CD46-213ENST00000471987 RTL9Q8NET4 1388 aa2.54□□□□□ -2
CD46-213ENST00000471987 MROH7-TTC4A0A0A0MT08 1334 aa2.54□□□□□ -2
CD46-213ENST00000471987 NRCAMQ92823 1304 aa2.54□□□□□ -2
CD46-213ENST00000471987 TRBV11-1A0A0K0K1C0 115 aa2.54□□□□□ -2
CD46-213ENST00000471987 OR2AT4A6NND4 320 aa2.54□□□□□ -2
CD46-213ENST00000471987 PPIAL4DF5H284 164 aa2.54□□□□□ -2
CD46-213ENST00000471987 SLC28A1O00337 649 aa2.54□□□□□ -2
CD46-213ENST00000471987 OR10H3O60404 316 aa2.54□□□□□ -2
CD46-213ENST00000471987 CTNSO60931 367 aa2.54□□□□□ -2
CD46-213ENST00000471987 ZMPSTE24O75844 475 aa2.54□□□□□ -2
CD46-213ENST00000471987 BRI3O95415 125 aa2.54□□□□□ -2
CD46-213ENST00000471987 FADS2O95864 444 aaKnown RBP2.54□□□□□ -2
CD46-213ENST00000471987 RPN2P04844 631 aa2.54□□□□□ -2
CD46-213ENST00000471987 ZDHHC11BP0C7U3 371 aa2.54□□□□□ -2
CD46-213ENST00000471987 LINC00614P0C842 121 aa2.54□□□□□ -2
CD46-213ENST00000471987 GIMD1P0DJR0 217 aa2.54□□□□□ -2
CD46-213ENST00000471987 GFAPP14136 432 aa2.54□□□□□ -2
CD46-213ENST00000471987 ZNF823P16415 610 aa2.54□□□□□ -2
CD46-213ENST00000471987 XRCC1P18887 633 aaPredicted RBP2.54□□□□□ -2
CD46-213ENST00000471987 TPSB2P20231 275 aa2.54□□□□□ -2
CD46-213ENST00000471987 HTR1EP28566 365 aa2.54□□□□□ -2
CD46-213ENST00000471987 CRABP1P29762 137 aa2.54□□□□□ -2
CD46-213ENST00000471987 MARCKSP29966 332 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms