RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMEM255AQ5JRV8 349 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 TMEM211Q6ICI0 200 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 SLC16A9Q7RTY1 509 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 DPY19L4Q7Z388 723 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 PRR7Q8TB68 274 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 FNDC8Q8TC99 324 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 RPS4Y2Q8TD47 263 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 YTHDF1Q9BYJ9 559 aaKnown RBP8.62□□□□□ -1.03
SF3A1-207ENST00000471342 PIGMQ9H3S5 423 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 ISG20L2Q9H9L3 353 aaKnown RBP8.62□□□□□ -1.03
SF3A1-207ENST00000471342 SLC17A5Q9NRA2 495 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 IMPAD1Q9NX62 359 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 ERVK13-1Q9NX77 482 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 GALNT8Q9NY28 637 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF319Q9P2F9 582 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 MRM2Q9UI43 246 aaKnown RBP8.62□□□□□ -1.03
SF3A1-207ENST00000471342 PROCRQ9UNN8 238 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 DIMT1Q9UNQ2 313 aaKnown RBP8.62□□□□□ -1.03
SF3A1-207ENST00000471342 PCDHGB1Q9Y5G3 927 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 CACNA1CQ13936 2221 aa8.62□□□□□ -1.03
SF3A1-207ENST00000471342 RTTNQ86VV8 2226 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 A0A096LPE4 126 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 A0A1B0GUH1 482 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 NKX2-6A6NCS4 301 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 OR6C6A6NF89 314 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 SLC22A31A6NKX4 558 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF593O00488 134 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 RER1O15258 196 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 SYNGR3O43761 229 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 PNPP00491 289 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 IGKV3-15P01624 115 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 HLA-HP01893 362 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 MT-ND2P03891 347 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 LYNP07948 512 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 MRPL3P09001 348 aaKnown RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 CST2P09228 141 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF14P17017 642 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 AGAP20933 346 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 MSR1P21757 451 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 UGT2B10P36537 528 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 OPRL1P41146 370 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 NAA10P41227 235 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 TUBA1BP68363 451 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 TUBA4AP68366 448 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ST3GAL4Q11206 333 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 RAB40BQ12829 278 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 P2RY6Q15077 328 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 KCTD21Q4G0X4 260 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 CDONQ4KMG0 1287 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 KLHL12Q53G59 568 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 RBM48Q5RL73 367 aaKnown RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ANKRD16Q6P6B7 361 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 TUBA1AQ71U36 451 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 HDDC2Q7Z4H3 204 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 LUZP2Q86TE4 346 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 NAA40Q86UY6 237 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 LINC00346Q8IVM7 164 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 GID4Q8IVV7 300 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 MCEMP1Q8IX19 187 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF100Q8IYN0 542 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF786Q8N393 782 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 PROKR2Q8NFJ6 384 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 OR51G2Q8NGK0 314 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 RNF133Q8WVZ7 376 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 OR5M11Q96RB7 305 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 ABHD6Q9BV23 337 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 RBM24Q9BX46 236 aaKnown RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 YIPF3Q9GZM5 350 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 DDX28Q9NUL7 540 aaKnown RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 CLN6Q9NWW5 311 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 SLCO1C1Q9NYB5 712 aa8.61□□□□□ -1.03
SF3A1-207ENST00000471342 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-207ENST00000471342 OR5H1A6NKK0 313 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF587BE7ETH6 402 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 AKAP8O43823 692 aaKnown RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 PTHP01270 115 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 IGLV3-1P01715 115 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 TFAP2AP05549 437 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 CELA3BP08861 270 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF32P17041 273 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 MAP2K4P45985 399 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 ENTPD1P49961 510 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 CHN2P52757 468 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 EMX1Q04741 257 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 GLO1Q04760 184 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 TAB1Q15750 504 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 OR2G6Q5TZ20 316 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF813Q6ZN06 617 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 COLCA1Q6ZS62 124 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 BEND4Q6ZU67 534 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 SYT9Q86SS6 491 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 SLC35F2Q8IXU6 374 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 PAQR4Q8N4S7 273 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 NANOGP1Q8N7R0 232 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 HSD17B8Q92506 261 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms