RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 WNT11O96014 354 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 INHBBP09529 407 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 FCGR2AP12318 317 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 MSR1P21757 451 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 DCTDP32321 178 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 OPRL1P41146 370 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 MTNR1BP49286 362 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 RORCP51449 518 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 CCR9P51686 369 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 RIDAP52758 137 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 RPS11P62280 158 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS52-216ENST00000471309 ROR2Q01974 943 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 ALKBH1Q13686 389 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 RNPS1Q15287 305 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 STK11Q15831 433 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 MOGQ16653 247 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 YIF1BQ5BJH7 314 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ZNF544Q6NX49 715 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 RHOUQ7L0Q8 258 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 DCXRQ7Z4W1 244 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 KRT77Q7Z794 578 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 LINC00346Q8IVM7 164 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 TEX19Q8NA77 164 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 OR6Q1Q8NGQ2 317 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 OR2G2Q8NGZ5 317 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 PHYHIPQ92561 330 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 SLAMF6Q96DU3 332 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 MAP6Q96JE9 813 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 C4orf45Q96LM5 186 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 C1orf198Q9H425 327 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 SEC61A2Q9H9S3 476 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 BCO1Q9HAY6 547 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ELOVL3Q9HB03 270 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 EMC7Q9NPA0 242 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 B3GAT2Q9NPZ5 323 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 POLR1DQ9Y2S0 133 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ZNF281Q9Y2X9 895 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 LHFPL6Q9Y693 200 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 CNOT1A5YKK6 2376 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 TPRP12270 2363 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 DMXL1Q9Y485 3027 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 FREM3P0C091 2139 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 NCOR2Q9Y618 2525 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 IQCMA0A1B0GVH7 501 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 MED19A0JLT2 244 aaPredicted RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR6C65A6NJZ3 312 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR4C45A6NMZ5 311 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 ZNF878C9JN71 531 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 MKRN2OSH3BPM6 223 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 K7ENP7 123 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 DVL2O14641 736 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 CASKO14936 926 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 RRP8O43159 456 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 SRSF10O75494 262 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 ARL6IP5O75915 188 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 ZFPL1O95159 310 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PDGFAP04085 211 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 MYL9P24844 172 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 CALRP27797 417 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 CDAP32320 146 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 NTF4P34130 210 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 SDC2P34741 201 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 GUCA1AP43080 201 aaPredicted RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 MRPS34P82930 218 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 INSL4Q14641 139 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 C3AR1Q16581 482 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 ZMAT1Q5H9K5 638 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 WDR38Q5JTN6 314 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR7E24Q6IFN5 339 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 RPUSD3Q6P087 351 aaKnown RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 INO80CQ6PI98 192 aaPredicted RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 CHMP1BQ7LBR1 199 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 CEACAM19Q7Z692 300 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 SIAH3Q8IW03 269 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 GPR137CQ8N3F9 429 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PRSS35Q8N3Z0 413 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR13C5Q8NGS8 318 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR2AJ1Q8NGZ0 328 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 OR5AK2Q8NH90 309 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 CPT1CQ8TCG5 803 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 RGP1Q92546 391 aaPredicted RBP8.29□□□□□ -1.08
VPS52-216ENST00000471309 AP3S1Q92572 193 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 THRSPQ92748 146 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 NABP1Q96AH0 204 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PDCD1LG2Q9BQ51 273 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 BARHL1Q9BZE3 327 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 LINC00470Q9BZP3 86 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 COMMD4Q9H0A8 199 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 AKIP1Q9NQ31 210 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
VPS52-216ENST00000471309 PARPBPQ9NWS1 579 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms