RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 AHSPQ9NZD4 102 aa4.05□□□□□ -1.76
CCDC39-202ENST00000471307 VPS29Q9UBQ0 182 aa4.05□□□□□ -1.76
CCDC39-202ENST00000471307 TMED5Q9Y3A6 229 aa4.05□□□□□ -1.76
CCDC39-202ENST00000471307 FIS1Q9Y3D6 152 aa4.05□□□□□ -1.76
CCDC39-202ENST00000471307 RIF1Q5UIP0 2472 aaKnown RBP4.05□□□□□ -1.76
CCDC39-202ENST00000471307 KNTC1P50748 2209 aa4.05□□□□□ -1.76
CCDC39-202ENST00000471307 SEC16AO15027 2179 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 MUC6Q6W4X9 2439 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ATP6AP2A0A1C7CYW4 349 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TLCD2A6NGC4 264 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TXNDC9O14530 226 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 LSM1O15116 133 aaKnown RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 UBDO15205 165 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 OR1F1O43749 312 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 LCMT2O60294 686 aaKnown RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 CPNE6O95741 557 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ANKRD34CP0C6C1 535 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 NCF2P19878 526 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 MAGP20916 626 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 SOX6P35712 828 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 MRPL19P49406 292 aaKnown RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 GBX2P52951 348 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ERVK-8P63133 956 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 SF3A2Q15428 464 aaKnown RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ATP6AP1LQ52LC2 224 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 RFTN2Q52LD8 501 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 NHLRC3Q5JS37 347 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TCHHL1Q5QJ38 904 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 GUSBP11Q6P575 273 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 DLEU7Q6UYE1 221 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TRPM8Q7Z2W7 1104 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 PAGE2Q7Z2X7 111 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 FAM9CQ8IZT9 166 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 MFSD9Q8NBP5 474 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF740Q8NDX6 193 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TCEAL3Q969E4 200 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 TM4SF19Q96DZ7 209 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ANKRD27Q96NW4 1050 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 OR2A5Q96R48 311 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 OR52B2Q96RD2 323 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 SERPINI1Q99574 410 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 SPAG8Q99932 426 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 EBF4Q9BQW3 602 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF559Q9BR84 538 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 CENPKQ9BS16 269 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 NLNQ9BYT8 704 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ACPTQ9BZG2 426 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 LRRN3Q9H3W5 708 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 GPR173Q9NS66 373 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 C1orf109Q9NX04 203 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 EIF3LQ9Y262 564 aaKnown RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 BTRCQ9Y297 605 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 U3KQA8 63 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF292O60281 2723 aa4.04□□□□□ -1.76
CCDC39-202ENST00000471307 ZFHX2Q9C0A1 2572 aaPredicted RBP4.04□□□□□ -1.76
CCDC39-202ENST00000471307 MN1Q10571 1320 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 COL5A1P20908 1838 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 PTPRZ1P23471 2315 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 A0A087WZY1 265 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 A0A0B4J203 849 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 IGHV5-51A0A0C4DH38 117 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 LRIT2A6NDA9 550 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 CCT8L1PA6NM43 557 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 E9PBE3 544 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TMX2-CTNND1H3BSU7 103 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 FBP2O00757 339 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 HAT1O14929 419 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MLNRO43193 412 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SCO2O43819 266 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 KLHL41O60662 606 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MYO1DO94832 1006 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SEMA3DO95025 777 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 HCKP08631 526 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SLC35G6P0C7Q6 338 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 THRBP10828 461 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 PRPS2P11908 318 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 IDO1P14902 403 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TNNI3P19429 210 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SLC1A3P43003 542 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MAGEB1P43366 347 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 ACADVLP49748 655 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MNAT1P51948 309 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 STXBP1P61764 594 aaKnown RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RPP38P78345 283 aaKnown RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 CCL7P80098 99 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 HMGCS1Q01581 520 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RGS1Q08116 209 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TGM3Q08188 693 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 PDZK1IP1Q13113 114 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 ILKQ13418 452 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RIPK1Q13546 671 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 KIAA0040Q15053 153 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 ZIC1Q15915 447 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 ADPRMQ3LIE5 342 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SPIN4Q56A73 249 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 IL23RQ5VWK5 629 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 NKAIN2Q5VXU1 208 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms