RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RBX1P62877 108 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 MRPL28Q13084 256 aaKnown RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 KRTAP13-4Q3LI77 160 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 NADK2Q4G0N4 442 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PTPN20Q4JDL3 420 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ORMDL2Q53FV1 153 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ANKRD22Q5VYY1 191 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 HCP5Q6MZN7 132 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SASS6Q6UVJ0 657 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 UQCC3Q6UW78 93 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 CASP12Q6UXS9 341 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 FBXW12Q6X9E4 464 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 Q6ZPB1 254 aaPredicted RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SLC16A13Q7RTY0 426 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM135Q86UB9 458 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 CDKL3Q8IVW4 592 aaPredicted RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SPANXA2-OT1Q8N9U9 137 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 APCDD1LQ8NCL9 501 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 OR10R2Q8NGX6 335 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 OR6N1Q8NGY5 312 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 EMG1Q92979 244 aaKnown RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 NTAN1Q96AB6 310 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 C10orf35Q96D05 121 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PIK3IP1Q96FE7 263 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PSKH2Q96QS6 385 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF607Q96SK3 696 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TIMM17AQ99595 171 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 COPS8Q99627 209 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SH3GL1Q99961 368 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TM2D3Q9BRN9 247 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SHANK2-AS3Q9BTD1 123 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TRIM62Q9BVG3 475 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 MFFQ9GZY8 342 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 RAB33BQ9H082 229 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 DHX35Q9H5Z1 703 aaKnown RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 AZI2Q9H6S1 392 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 NIPAL2Q9H841 368 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 SLC38A10Q9HBR0 1119 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 POLE4Q9NR33 117 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ENOPH1Q9UHY7 261 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF639Q9UID6 485 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 TMED5Q9Y3A6 229 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 N6AMT1Q9Y5N5 214 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 PNPLA6Q8IY17 1366 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 LAMA2P24043 3122 aaKnown RBP0.52□□□□□ -2.33
UBXN4-207ENST00000471246 RYR1P21817 5038 aa0.52□□□□□ -2.33
UBXN4-207ENST00000471246 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 TRAV6A0A075B6T7 132 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 BTNL10A8MVZ5 291 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FOXE1O00358 373 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 GOSR2O14653 212 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SOX15O60248 233 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 ERLIN2O94905 339 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 IGLV6-57P01721 117 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 OR8U9P0C7N5 309 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 DBTP11182 482 aaKnown RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 CD99P14209 185 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 RAB3BP20337 219 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 ME2P23368 584 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 CD1CP29017 333 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 VHLP40337 213 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 GRIA1P42261 906 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FBXW4P57775 412 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 MEF2CQ06413 473 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FUT5Q11128 374 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 ATRQ13535 2644 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 CLINT1Q14677 625 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 HSP90AA5PQ58FG0 334 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 THEM4Q5T1C6 240 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FAM208BQ5VWN6 2430 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 METTL21CQ5VZV1 264 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 GUSBP11Q6P575 273 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM136Q6ZRR5 245 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 WDFY4Q6ZS81 3184 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SLC25A48Q6ZT89 311 aaKnown RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 LINC00336Q6ZUF6 198 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 DENND4AQ7Z401 1863 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SNX20Q7Z614 316 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PSTKQ8IV42 348 aaKnown RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FAM9BQ8IZU0 186 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 HSD17B11Q8NBQ5 300 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FAM83FQ8NEG4 500 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF680Q8NEM1 530 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 OR2T34Q8NGX1 318 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 OR10J6PQ8NGY7 276 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PIFOQ8TCI5 191 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 KLF14Q8TD94 323 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 RLN3Q8WXF3 142 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PTX4Q96A99 478 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 MRGPRFQ96AM1 343 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SEH1LQ96EE3 360 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 COQ2Q96H96 371 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PLEKHA8Q96JA3 519 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 KIF16BQ96L93 1317 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 RPRD1AQ96P16 312 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 CNN2Q99439 309 aaKnown RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 NPY6RQ99463 290 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 KLF6Q99612 283 aaPredicted RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 LZTS2Q9BRK4 669 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms