RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SLC38A5Q8WUX1 472 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 C10orf90Q96M02 699 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 IER2Q9BTL4 223 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 DUSP23Q9BVJ7 150 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PSENENQ9NZ42 101 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLCO1B1Q9Y6L6 691 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLIT3O75094 1523 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GLI3P10071 1580 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 WNT7AO00755 349 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SH2D1BO14796 132 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ACSM4P0C7M7 580 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PSMB1P20618 241 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GLRA1P23415 457 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ITGB7P26010 798 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 GABRB3P28472 473 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PIGAP37287 484 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 HTR6P50406 440 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 PCBP4P57723 403 aaKnown RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 FDX2Q6P4F2 183 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM178AQ8NBL3 297 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR6K3Q8NGY3 331 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 BADQ92934 168 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 IGSF21Q96ID5 467 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OR6C1Q96RD1 312 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF300Q96RE9 604 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC12A9Q9BXP2 914 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 OCEL1Q9H607 264 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 EPHX3Q9H6B9 360 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 DOK5Q9P104 306 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 IL17BQ9UHF5 180 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
BRCA1-210ENST00000471181 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 A0A0U1RQF3 1178 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MMP7P09237 267 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 GLI4P10075 376 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ACAA2P42765 397 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 RAB1AP62820 205 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 EVX2Q03828 476 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 LCN8Q6JVE9 175 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ANKRD16Q6P6B7 361 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SFTPA2Q8IWL1 248 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SFTPA1Q8IWL2 248 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 TMEFF1Q8IYR6 380 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SCARB1Q8WTV0 552 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 TOE1Q96GM8 510 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 PEBP4Q96S96 227 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 GMLQ99445 158 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CTRCQ99895 268 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MRPL13Q9BYD1 178 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 BTNL2Q9UIR0 455 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM24AA6NFZ4 105 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF195O14628 629 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CBR3O75828 277 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ICAM2P13598 275 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CD70P32970 193 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SPINT3P49223 89 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 HERVK_113P61574 105 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF816Q0VGE8 651 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SPCS2Q15005 226 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FCN2Q15485 313 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MOGAT2Q3SYC2 334 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 NKAIN2Q5VXU1 208 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ADGRE4PQ86SQ3 457 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CLEC14AQ86T13 490 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 PDZD3Q86UT5 571 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 EIF4E3Q8N5X7 224 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 PQLC3Q8N755 202 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CHST14Q8NCH0 376 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 AKR7LQ8NHP1 331 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 LHX4Q969G2 390 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 WDR76Q9H967 626 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 NPIPB15A6NHN6 443 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM72CH0Y354 149 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 K7ERU9 68 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 XRCC2O43543 280 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 LY86O95711 162 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 QDPRP09417 244 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 IRS1P35568 1242 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SRP9P49458 86 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 HCCSP53701 268 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 RPS23P62266 143 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM72AQ5TYM5 149 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM72DQ6L9T8 149 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAM72BQ86X60 149 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 LAX1Q8IWV1 398 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 OR4D10Q8NGI6 311 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM40Q8WWA1 233 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 RAB37Q96AX2 223 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF2Q9BSG1 426 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 DEFB127Q9H1M4 99 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CD207Q9UJ71 328 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 WASHC3Q9Y3C0 194 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 STRAPQ9Y3F4 350 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 PAPPAQ13219 1627 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MEIKINA0A087WXM9 373 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 TMED7-TICAM2A0A0A6YYA0 188 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms