RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 IGFN1Q86VF2 1251 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 CCDC103Q8IW40 242 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 UEVLDQ8IX04 471 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 C8orf59Q8N0T1 100 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-206ENST00000471037 IQCF1Q8N6M8 205 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 FAM81AQ8TBF8 368 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 TRUB1Q8WWH5 349 aaKnown RBP7.88□□□□□ -1.15
SF3A1-206ENST00000471037 TMEM45BQ96B21 275 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
SF3A1-206ENST00000471037 PLEKHA8Q96JA3 519 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 OXGR1Q96P68 337 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 SORCS2Q96PQ0 1159 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 SF3B5Q9BWJ5 86 aaKnown RBP7.88□□□□□ -1.15
SF3A1-206ENST00000471037 C1QTNF6Q9BXI9 259 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 CHODLQ9H9P2 273 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 SLC7A10Q9NS82 523 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 PARPBPQ9NWS1 579 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 IL20RAQ9UHF4 553 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 LRCH1Q9Y2L9 728 aa7.88□□□□□ -1.15
SF3A1-206ENST00000471037 IGHV4-61A0A0C4DH41 118 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 LOC390937A0A1W2PQ73 354 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 A6NIZ1 184 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 RIIAD1A6NNX1 92 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 M0R3G1 203 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 SURF4O15260 269 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 CLIC3O95833 236 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TXNDC12O95881 172 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 WNT11O96014 354 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 F13BP05160 661 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 GNAO1P09471 354 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ZNF3P17036 446 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ZNF43P17038 809 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 MPGP29372 298 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 NOS3P29474 1203 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 RAP1BP61224 184 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 SNRPGP62308 76 aaKnown RBP7.87□□□□□ -1.15
SF3A1-206ENST00000471037 RAP1AP62834 184 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ERVK-25P63136 954 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 IL5RAQ01344 420 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TEKQ02763 1124 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 POU3F1Q03052 451 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-206ENST00000471037 C1DQ13901 141 aaKnown RBP7.87□□□□□ -1.15
SF3A1-206ENST00000471037 SLC17A1Q14916 467 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 SNAPC1Q16533 368 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TSPO2Q5TGU0 170 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 KRT80Q6KB66 452 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ACSM5Q6NUN0 579 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 THAP5Q7Z6K1 395 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ADCK1Q86TW2 530 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 GPAT4Q86UL3 456 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 OR8J1Q8NGP2 316 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 FBXO17Q96EF6 278 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 CNBD2Q96M20 576 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 ERMAPQ96PL5 475 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TXNIPQ9H3M7 391 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 FN3KQ9H479 309 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 OBP2BQ9NPH6 170 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 CMC2Q9NRP2 79 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TVP23BQ9NYZ1 205 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 B3GAT1Q9P2W7 334 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 GRHPRQ9UBQ7 328 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 UPB1Q9UBR1 384 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 KLHL21Q9UJP4 597 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 MOKQ9UQ07 419 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 IER3IP1Q9Y5U9 82 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.87□□□□□ -1.151e-8■■□□□ 13.8
SF3A1-206ENST00000471037 MALRD1Q5VYJ5 2156 aa7.87□□□□□ -1.15
SF3A1-206ENST00000471037 TEX13CA0A0J9YWL9 993 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 B9A039 149 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 XKRYO14609 159 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 TRAF3IP2O43734 574 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 AKAP8O43823 692 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 PRKYO43930 277 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 BCL10O95999 233 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 PAICSP22234 425 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 PAX7P23759 505 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 RPL27P61353 136 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 ISL1P61371 349 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 SNRPD2P62316 118 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 EFNB1P98172 346 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 SRSF2Q01130 221 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 TOP3AQ13472 1001 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 KRR1Q13601 381 aaKnown RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 MAD2L1BPQ15013 274 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-206ENST00000471037 C9orf135Q5VTT2 229 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 LIPNQ5VXI9 398 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 KLHL24Q6TFL4 600 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 NHLRC1Q6VVB1 395 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 IL17RELQ6ZVW7 336 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 PTCHD4Q6ZW05 846 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 SLC35D2Q76EJ3 337 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 ENTHD1Q8IYW4 607 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 KDM8Q8N371 416 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 POMGNT2Q8NAT1 580 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 ZNF540Q8NDQ6 660 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 OR9K2Q8NGE7 335 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 RHOXF1Q8NHV9 184 aa7.86□□□□□ -1.15
SF3A1-206ENST00000471037 ZNF519Q8TB69 540 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms