RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 BEX1Q9HBH7 125 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 BARX1Q9HBU1 254 aaPredicted RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SLC6A20Q9NP91 592 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 RRP7BPQ9NSQ0 103 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PIGVQ9NUD9 493 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 MRPL27Q9P0M9 148 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 COMMD3Q9UBI1 195 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 A4GNTQ9UNA3 340 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PSG8Q9UQ74 426 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 FARSAQ9Y285 508 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SIT1Q9Y3P8 196 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 KIF20BQ96Q89 1820 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ATRNO75882 1429 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ATP10DQ9P241 1426 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CHD4Q14839 1912 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PIK3C2BO00750 1634 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 MYO5BQ9ULV0 1848 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LOC102723996A0A087X1L8 192 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LOC105369274A0A096LPK9 316 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 A0A0G2JND7 137 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LOC102723532A0A0G2JNH3 316 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 YJEFN3A6XGL0 299 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 RNF212BA8MTL3 300 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GRXCR1A8MXD5 290 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 G3V4G9 280 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 C15orf65H3BRN8 121 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SLC17A3O00476 420 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ACOT8O14734 319 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PHOX2AO14813 284 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 YY2O15391 372 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 UTS2O95399 124 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 CST1P01037 141 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 HPXP02790 462 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 RLN1P04808 185 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ADRA2AP08913 450 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GLI4P10075 376 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NPPBP16860 134 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FAHP16930 419 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 RAB5AP20339 215 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 BMP5P22003 454 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ACHEP22303 614 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 MMP11P24347 488 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 DUSP1P28562 367 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FCGR2BP31994 310 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GLP1RP43220 463 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 AQP5P55064 265 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 RAP2BP61225 183 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NCS1P62166 190 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SNRPD1P62314 119 aaKnown RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SRSF2Q01130 221 aaKnown RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SCAPQ12770 1279 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM115Q12893 351 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 CLINT1Q14677 625 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PRSS8Q16651 343 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 EMC4Q5J8M3 183 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LRRC73Q5JTD7 316 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 TIMM23BQ5SRD1 257 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LDLRAD2Q5SZI1 272 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SLC22A10Q63ZE4 541 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 KIAA0895LQ68EN5 471 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PAMR1Q6UXH9 720 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ALKAL1Q6UXT8 129 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 KCTD1Q719H9 257 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 AHSA2Q719I0 299 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 H2BFWTQ7Z2G1 175 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM25Q86YD3 366 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 APOBEC3FQ8IUX4 373 aaKnown RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 TRIM48Q8IWZ4 208 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 KLHDC8BQ8IXV7 354 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR4N4Q8N0Y3 316 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SLC16A11Q8NCK7 471 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR11H4Q8NGC9 324 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR4K2Q8NGD2 314 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR52B6Q8NGF0 335 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR5M3Q8NGP4 307 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SLC35B2Q8TB61 432 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SMAP2Q8WU79 429 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SKA2Q8WVK7 121 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FAM151AQ8WW52 585 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ST8SIA1Q92185 356 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NAT6Q93015 286 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 RERGQ96A58 199 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FAM131CQ96AQ9 280 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GPR146Q96CH1 333 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 LGALS12Q96DT0 336 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 WDR34Q96EX3 536 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GALNT14Q96FL9 552 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 CDKN2AIPNLQ96HQ2 116 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SLC35E1Q96K37 410 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 IL17FQ96PD4 163 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NRIP2Q9BQI9 281 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SPATA5L1Q9BVQ7 753 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 FTHL17Q9BXU8 183 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 OR2J1Q9GZK6 312 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 MEGF9Q9H1U4 602 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 MMP28Q9H239 520 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PATZ1Q9HBE1 687 aaKnown RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NOX3Q9HBY0 568 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms