RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 DGCR6Q14129 220 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 MOGQ16653 247 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 ZBED5Q49AG3 693 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 SPATA46Q5T0L3 261 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 FKBP9P1Q75LS8 142 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 GLCCI1Q86VQ1 547 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 C1orf174Q8IYL3 243 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 FAM162AQ96A26 154 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 KCTD14Q9BQ13 255 aaPredicted RBP13.88□□□□□ -0.19
COL9A3-208ENST00000469802 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 TIMM10BQ9Y5J6 103 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 IGHV1-69-2A0A0G2JMI3 117 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 ZSCAN5BA6NJL1 495 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 AHCYL1O43865 530 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 CDC14BO60729 498 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 MT-ND5P03915 603 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 MSMBP08118 114 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 DRD4P21917 467 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 PSME3P61289 254 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
COL9A3-208ENST00000469802 ZNF718Q3SXZ3 478 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 FAM209AQ5JX71 171 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 ZNF774Q6NX45 483 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 USP51Q70EK9 711 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 CYP4Z1Q86W10 505 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 ALDH16A1Q8IZ83 802 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 RFLNBQ8N5W9 214 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 SLC25A40Q8TBP6 338 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 KLF14Q8TD94 323 aaPredicted RBP13.87□□□□□ -0.19
COL9A3-208ENST00000469802 TMEM186Q96B77 213 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 Q96M85 177 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
COL9A3-208ENST00000469802 WACQ9BTA9 647 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 C19orf24Q9BVV8 132 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 OR2J1Q9GZK6 312 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 SAP30LQ9HAJ7 183 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 TREM2Q9NZC2 230 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 NDUFAF4Q9P032 175 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 EIF3KQ9UBQ5 218 aaKnown RBP13.87□□□□□ -0.19
COL9A3-208ENST00000469802 GRHPRQ9UBQ7 328 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 CGGBP1Q9UFW8 167 aaPredicted RBP13.87□□□□□ -0.19
COL9A3-208ENST00000469802 RPS6KA6Q9UK32 745 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
COL9A3-208ENST00000469802 DYSFO75923 2080 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 PRSS37A4D1T9 235 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 C12orf71A8MTZ7 269 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 PTP4A3O75365 173 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 DEAF1O75398 565 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 NGFP01138 241 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 IGHV1-46P01743 117 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 H1F0P07305 194 aaKnown RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 COX5BP10606 129 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 CTLA4P16410 223 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 PRDX6P30041 224 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 GCH1P30793 250 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 RPL4P36578 427 aaKnown RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 ZNF81P51508 661 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 FXYD6P3P58550 94 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 PPP1CBP62140 327 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 TEKQ02763 1124 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 RINLQ6ZS11 566 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 FAM86B1Q8N7N1 296 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 ABHD4Q8TB40 342 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 CMTM5Q96DZ9 223 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 FAM46AQ96IP4 442 aaKnown RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 C7orf34Q96L11 122 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 DHRS1Q96LJ7 313 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 ZNF570Q96NI8 536 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 FUZQ9BT04 418 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 EMC7Q9NPA0 242 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 SPAG4Q9NPE6 437 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 DCAF13Q9NV06 445 aaKnown RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 HIF1ANQ9NWT6 349 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 NDRG4Q9ULP0 352 aaKnown RBP13.86□□□□□ -0.19
COL9A3-208ENST00000469802 CACNG2Q9Y698 323 aa13.86□□□□□ -0.19
COL9A3-208ENST00000469802 WNK2Q9Y3S1 2297 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 TEX13CA0A0J9YWL9 993 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 RHCEP18577 417 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
COL9A3-208ENST00000469802 OMPP47874 163 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 KRR1Q13601 381 aaKnown RBP13.85□□□□□ -0.19
COL9A3-208ENST00000469802 TSTQ16762 297 aaKnown RBP13.85□□□□□ -0.19
COL9A3-208ENST00000469802 AVPI1Q5T686 147 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 OR51F2Q8NH61 342 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 C4orf45Q96LM5 186 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 ZNF665Q9H7R5 613 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 ELOVL3Q9HB03 270 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 NRIP3Q9NQ35 241 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 CYSLTR2Q9NS75 346 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 EGFL7Q9UHF1 273 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 KLHL21Q9UJP4 597 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
COL9A3-208ENST00000469802 TRAV20A0A0B4J274 112 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 TRBV4-1A0A0J9YWV2 114 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 CLDN25C9JDP6 229 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 XKRYO14609 159 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 NDUFB2O95178 105 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SEMG1P04279 462 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 CD55P08174 381 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms