RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 ZNF680Q8NEM1 530 aa17.08■□□□□ 0.32
VIM-203ENST00000469543 OR52N5Q8NH56 324 aa17.08■□□□□ 0.32
VIM-203ENST00000469543 CYYR1Q96J86 154 aa17.08■□□□□ 0.32
VIM-203ENST00000469543 GPR137Q96N19 417 aa17.08■□□□□ 0.32
VIM-203ENST00000469543 OR6C76A6NM76 312 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 NPIPA5E9PKD4 350 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 MASP2O00187 686 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 OR2T1O43869 369 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 VSIG10L2P0DP72 767 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 ZNF24P17028 368 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 GNG2P59768 71 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 C17orf67Q0P5P2 114 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 GPAT4Q86UL3 456 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 CATSPERDQ86XM0 798 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 OR51S1Q8NGJ8 323 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 NKD1Q969G9 470 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 OCIAD1Q9NX40 245 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 NPIPA1Q9UND3 350 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 ETV7Q9Y603 341 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 LY6G6EA0A0G2JKS1 128 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 TMEM269A0A1B0GVZ9 245 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 ZNF814B7Z6K7 855 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 P2RY10O00398 339 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 HRGP04196 525 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 RLN1P04808 185 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 CELA2AP08217 269 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 RAG2P55895 527 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 HSF1Q00613 529 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 KCTD18Q6PI47 426 aaPredicted RBP17.07■□□□□ 0.32
VIM-203ENST00000469543 ZNF627Q7L945 461 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 RNF144BQ7Z419 303 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 FGD2Q7Z6J4 655 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 ST7LQ8TDW4 575 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 ASB10Q8WXI3 467 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 MNTQ99583 582 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 AKAP7Q9P0M2 348 aaPredicted RBP17.07■□□□□ 0.32
VIM-203ENST00000469543 MGAT4CQ9UBM8 478 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 U3KQA8 63 aa17.07■□□□□ 0.32
VIM-203ENST00000469543 IGHV5-10-1A0A0J9YXX1 117 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 H7C417 338 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 SULT1B1O43704 296 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 RAMP1O60894 148 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 ZNF823P16415 610 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 CDAP32320 146 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 EMP2P54851 167 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 BIDP55957 195 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 AP3S2P59780 193 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 SEZ6L2Q6UXD5 910 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 GLDNQ6ZMI3 551 aaPredicted RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 H1FNTQ75WM6 255 aaPredicted RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 JAGN1Q8N5M9 183 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 PCED1AQ9H1Q7 454 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 G6PC2Q9NQR9 355 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 NPDC1Q9NQX5 325 aaPredicted RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 MTFP1Q9UDX5 166 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 CDV3Q9UKY7 258 aaKnown RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 PPIEQ9UNP9 301 aaKnown RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 PRRC2CQ9Y520 2896 aaKnown RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 ADAMTS20P59510 1910 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 COL5A1P20908 1838 aaPredicted RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 RAB11BQ15907 218 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 B3GNTL1Q67FW5 361 aaPredicted RBP17.06■□□□□ 0.32
VIM-203ENST00000469543 FAM198BQ6UWH4 519 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 FTMTQ8N4E7 242 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 MEIOBQ8N635 442 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 ASB17Q8WXJ9 295 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 TMEM234Q8WY98 164 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 SLC25A28Q96A46 364 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 KCNK17Q96T54 332 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 GINS4Q9BRT9 223 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 PIPOXQ9P0Z9 390 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 WNT16Q9UBV4 365 aa17.06■□□□□ 0.32
VIM-203ENST00000469543 A0A1W2PPC1 479 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 PHYHO14832 338 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 ZNF432O94892 652 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 GTF2F2P13984 249 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 LCN1P31025 176 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 POU4F3Q15319 338 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 WDR45BQ5MNZ6 344 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 PRAMEF20Q5VT98 475 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 CARD17Q5XLA6 110 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 FDX2Q6P4F2 183 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 ZNF782Q6ZMW2 699 aaPredicted RBP17.05■□□□□ 0.32
VIM-203ENST00000469543 OR13C3Q8NGS6 347 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 STK35Q8TDR2 534 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 HGDQ93099 445 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 HLA-CQ95604 372 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 CMKLR1Q99788 373 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 SOX7Q9BT81 388 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 TRAF4Q9BUZ4 470 aaPredicted RBP17.05■□□□□ 0.32
VIM-203ENST00000469543 TGIF2Q9GZN2 237 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 LOC107986453A0A1B0GWG9 222 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 ANKUB1A6NFN9 424 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 SLC17A2O00624 439 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 SMAD9O15198 467 aaKnown RBP17.05■□□□□ 0.32
VIM-203ENST00000469543 SRSF10O75494 262 aaKnown RBP17.05■□□□□ 0.32
VIM-203ENST00000469543 NDUFB6O95139 128 aa17.05■□□□□ 0.32
VIM-203ENST00000469543 TGM6O95932 706 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms