RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 BAIAP2L2Q6UXY1 529 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 LRRC69Q6ZNQ3 347 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 Q6ZNX1 250 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CREB3L2Q70SY1 520 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 RHOUQ7L0Q8 258 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 DCXRQ7Z4W1 244 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SLC22A16Q86VW1 577 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 LRRC28Q86X40 367 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CATSPERDQ86XM0 798 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SULF2Q8IWU5 870 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 GDPD1Q8N9F7 314 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 OR13C5Q8NGS8 318 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SETD6Q8TBK2 473 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ST7LQ8TDW4 575 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 RNF133Q8WVZ7 376 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 C11orf40Q8WZ69 217 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TMEM54Q969K7 222 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ADGRG7Q96K78 797 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 FOXN4Q96NZ1 517 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 DERL3Q96Q80 235 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 OR2M2Q96R28 347 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 AMELYQ99218 206 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TTTY12Q9BZ98 90 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 C1orf198Q9H425 327 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TCF7L1Q9HCS4 588 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ABCB10Q9NRK6 738 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 GLTPQ9NZD2 209 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 GTF2A1LQ9UNN4 478 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 R4GMQ9 66 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 V9GYH0 126 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ARHGAP21Q5T5U3 1957 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SMIM30A4D0T7 59 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 PINLYPA6NC86 204 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FAM25AB3EWG3 89 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FAM25CB3EWG5 89 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FAM25GB3EWG6 89 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 DVL2O14641 736 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 TBX1O43435 398 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CXCL13O43927 109 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 RAMP1O60894 148 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 NCR1O76036 304 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SYNGR4O95473 234 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 PTTG1O95997 202 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 F10P00742 488 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 QDPRP09417 244 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 RFPL3SP0C7P2 107 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 OCMP0CE72 109 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 PSKH1P11801 424 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 MSR1P21757 451 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 ACHEP22303 614 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 HSD11B1P28845 292 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 KIR3DL2P43630 455 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 PSMD7P51665 324 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CLDN20P56880 219 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 LSM6P62312 80 aaKnown RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CDC20Q12834 499 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 WDR38Q5JTN6 314 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FOXL2NBQ6ZUU3 175 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 VASH2Q86V25 355 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 LYSMD2Q8IV50 215 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 LINC00346Q8IVM7 164 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 UBQLNLQ8IYU4 475 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 TMEM123Q8N131 208 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CENPSQ8N2Z9 138 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FAM109AQ8N4B1 249 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 OR10D3Q8NH80 312 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 HSD17B8Q92506 261 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 RGP1Q92546 391 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 MCHR2Q969V1 340 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SLAMF6Q96DU3 332 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SCMH1Q96GD3 660 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 COX4I2Q96KJ9 171 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CMTM3Q96MX0 182 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SRXN1Q9BYN0 137 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 ULBP2Q9BZM5 246 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 MIXL1Q9H2W2 232 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 NELFAQ9H3P2 528 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SP140LQ9H930 580 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 SEC61A2Q9H9S3 476 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 NOX4Q9NPH5 578 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 EMC3Q9P0I2 261 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 CYB5R1Q9UHQ9 305 aa8.3□□□□□ -1.08
SMC1A-205ENST00000469129 ING1Q9UK53 422 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-205ENST00000469129 TRBV5-7A0A0A0MS05 114 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 IGHV3-15A0A0B4J1V0 119 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 IGKV1D-43A0A0B4J1Z2 117 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 A0A0G2JK05 382 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 TRABD2BA6NFA1 517 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 FABP12A6NFH5 140 aa8.29□□□□□ -1.08
SMC1A-205ENST00000469129 ACOD1A6NK06 481 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms