RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PGGHGQ32M88 737 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 KLHL12Q53G59 568 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF691Q5VV52 312 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SLX4IPQ5VYV7 408 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ABLIM2Q6H8Q1 611 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RPL13AP3Q6NVV1 102 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RPUSD3Q6P087 351 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 NIPAL3Q6P499 406 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PLBD1Q6P4A8 553 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 LEG1Q6P5S2 330 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 B3GLCTQ6Y288 498 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 C3P1Q6ZMU1 363 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC35D2Q76EJ3 337 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FCRLAQ7L513 359 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CPOQ8IVL8 374 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SIAH3Q8IW03 269 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ENTHD1Q8IYW4 607 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF786Q8N393 782 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PARP8Q8N3A8 854 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 LRRC75AQ8NAA5 344 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SYT14Q8NB59 555 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CYB561A3Q8NBI2 242 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC37A3Q8NCC5 494 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 LSM14AQ8ND56 463 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SETD9Q8NE22 299 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SDR9C7Q8NEX9 313 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 OR51L1Q8NGJ5 315 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 OR6S1Q8NH40 331 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CNIH3Q8TBE1 160 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ABHD5Q8WTS1 349 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FAR1Q8WVX9 515 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 MIB2Q96AX9 1013 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SARAFQ96BY9 339 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SNRNP40Q96DI7 357 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ADGRG7Q96K78 797 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 GPR137Q96N19 417 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RDH12Q96NR8 316 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 OXGR1Q96P68 337 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 BBC3Q96PG8 261 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 TSPAN32Q96QS1 320 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PRR25Q96S07 402 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 NMNAT3Q96T66 252 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 TUBA1CQ9BQE3 449 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 GABARAPL3Q9BY60 117 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 OR51V1Q9H2C8 321 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FN3KQ9H479 309 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 MED20Q9H944 212 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC25A19Q9HC21 320 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 AMBNQ9NP70 447 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PNPLA3Q9NST1 481 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CLN6Q9NWW5 311 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 MED29Q9NX70 200 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 MRPL39Q9NYK5 338 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 DNAJC27Q9NZQ0 273 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 STEAP1Q9UHE8 339 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 MCTS1Q9ULC4 181 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RASD1Q9Y272 281 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 TRAPPC4Q9Y296 219 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 NCKAP5O14513 1909 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FREM3P0C091 2139 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CNTRLQ7Z7A1 2325 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A1B0GVC2 190 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC22A20A6NK97 555 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 RIIAD1A6NNX1 92 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 M0R3G1 203 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 BHLHE40O14503 412 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 SMAD9O15198 467 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 SURF4O15260 269 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 XPNPEP2O43895 674 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 ENTPD6O75354 484 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 TRMUO75648 421 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 KRT33AO76009 404 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 AQP8O94778 261 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 TGM6O95932 706 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 IGF2P01344 180 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 IGHV3-9P01782 118 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 IGHG3P01860 377 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 HLA-DQA2P01906 255 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 GYPBP06028 91 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 CLUP10909 449 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 CPN1P15169 458 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF3P17036 446 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 MYF6P23409 242 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 EEF1B2P24534 225 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 PYCR1P32322 319 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 ATP6V1E1P36543 226 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 DAP3P51398 398 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 P2RY4P51582 365 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 ISL1P61371 349 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 SIRPAP78324 504 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 RUNX1T1Q06455 604 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 LGALS3BPQ08380 585 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 ITGADQ13349 1161 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 IL18R1Q13478 541 aa3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 KRR1Q13601 381 aaKnown RBP3.6□□□□□ -1.83
TMEM39A-204ENST00000468545 APOFQ13790 326 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms