RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 RNF128Q8TEB7 428 aa16.65■□□□□ 0.26
CHRNA4-203ENST00000467563 WDR12Q9GZL7 423 aaKnown RBP16.65■□□□□ 0.26
CHRNA4-203ENST00000467563 ACKR4Q9NPB9 350 aa16.65■□□□□ 0.26
CHRNA4-203ENST00000467563 FOXD3Q9UJU5 478 aaPredicted RBP16.65■□□□□ 0.26
CHRNA4-203ENST00000467563 LRP12Q9Y561 859 aa16.65■□□□□ 0.26
CHRNA4-203ENST00000467563 OR4C45A6NMZ5 311 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 CEACAM4O75871 244 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 PNPP00491 289 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 MAGEB1P43366 347 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 SLC10A1Q14973 349 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 PDSS1Q5T2R2 415 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 FCRLAQ7L513 359 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 ABHD3Q8WU67 409 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 CRNNQ9UBG3 495 aaPredicted RBP16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 LHFPL6Q9Y693 200 aa16.64■□□□□ 0.25
CHRNA4-203ENST00000467563 CYTIPO60759 359 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 KIR3DL2P43630 455 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF133P52736 654 aaPredicted RBP16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 PMP22Q01453 160 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 YIF1BQ5BJH7 314 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 FDX2Q6P4F2 183 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 PLXDC2Q6UX71 529 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 UNQ9370/PRO34162Q6UXP9 181 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 TEX19Q8NA77 164 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 OR5AK2Q8NH90 309 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 ABTB1Q969K4 478 aaPredicted RBP16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 C4orf45Q96LM5 186 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 DEFB127Q9H1M4 99 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 DNAJC13O75165 2243 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 TMCC2O75069 709 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 UCHL1P09936 223 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 NR2C1P13056 603 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 RIDAP52758 137 aaKnown RBP16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 WDR38Q5JTN6 314 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 C10orf128Q5T292 105 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 C20orf196Q8IYI0 205 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 DCBLD2Q96PD2 775 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 POLE4Q9NR33 117 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 FBXL3Q9UKT7 428 aa16.63■□□□□ 0.25
CHRNA4-203ENST00000467563 PHF3Q92576 2039 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 ACOT7O00154 380 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 GATBO75879 557 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 MFGE8Q08431 387 aaPredicted RBP16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 RASGEF1BQ0VAM2 473 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 KCNMB1Q16558 191 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 PAMR1Q6UXH9 720 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 RDH10Q8IZV5 341 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 OR10S1Q8NGN2 331 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 RNF133Q8WVZ7 376 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 ZDHHC11Q9H8X9 412 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 RCE1Q9Y256 329 aa16.62■□□□□ 0.25
CHRNA4-203ENST00000467563 PIN1P1O15428 100 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 RGS5O15539 181 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 MYL9P24844 172 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ODF4Q2M2E3 257 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 CFAP77Q6ZQR2 320 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 LAX1Q8IWV1 398 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 MEIOBQ8N635 442 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 PPP1R14AQ96A00 147 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ORAI1Q96D31 301 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SMAD5Q99717 465 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SCNM1Q9BWG6 230 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ACOD1A6NK06 481 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 TMEM212A6NML5 194 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF879B4DU55 563 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SRSF10O75494 262 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 TNFSF8P32971 234 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 OR10A3P58181 314 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 BCL2A1Q16548 175 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 C3AR1Q16581 482 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 C16orf87Q6PH81 154 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SYT9Q86SS6 491 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 CCDC190Q86UF4 302 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 OR10AC1Q8NH08 325 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 PNPLA2Q96AD5 504 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 INTS12Q96CB8 462 aaKnown RBP16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SLAMF6Q96DU3 332 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF837Q96EG3 531 aaPredicted RBP16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 ATF6BQ99941 703 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 NOX4Q9NPH5 578 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 CENPMQ9NSP4 180 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 GDF2Q9UK05 429 aaPredicted RBP16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 SLC22A13Q9Y226 551 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 POLR1DQ9Y2S0 133 aa16.61■□□□□ 0.25
CHRNA4-203ENST00000467563 TRAV1-2A0A0B4J238 106 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 DHHO43323 396 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 TPRA1Q86W33 373 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF676Q8N7Q3 588 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 IL17RDQ8NFM7 739 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 DERL3Q96Q80 235 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ULBP2Q9BZM5 246 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 C1orf198Q9H425 327 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 OCEL1Q9H607 264 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 LDAHQ9H6V9 325 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ASH2LQ9UBL3 628 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 URB1O60287 2271 aaKnown RBP16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 A0A0G2JK05 382 aa16.6■□□□□ 0.25
CHRNA4-203ENST00000467563 ZNF254O75437 659 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms