RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MFFQ9GZY8 342 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF286AQ9HBT8 521 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF236Q9UL36 1845 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ETV6P41212 452 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 CCR9P51686 369 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 SLC17A1Q14916 467 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 STEAP1BQ6NZ63 245 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 FAM199XQ6PEV8 388 aaPredicted RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 FNDC9Q8TBE3 224 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF681Q96N22 645 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 PPA2Q9H2U2 334 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 PTTG3PQ9NZH4 202 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 LCTP09848 1927 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 SLC34A2O95436 690 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 TK1P04183 234 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ELK1P19419 428 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 DOC2BQ14184 412 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 EBPQ15125 230 aaKnown RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ANKRD37Q7Z713 158 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 MYOTQ9UBF9 498 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 B3GALT1Q9Y5Z6 326 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 CNOT4O95628 575 aaKnown RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 CASP3P42574 277 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 GZMMP51124 257 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 PSG6Q00889 435 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 SIGLEC11Q96RL6 698 aa12.5□□□□□ -0.41
BRAT1-203ENST00000467558 CGGBP1Q9UFW8 167 aaPredicted RBP12.5□□□□□ -0.41
BRAT1-203ENST00000467558 A0A1W2PS29 197 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 AIPO00170 330 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 ALDOBP05062 364 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 LIPCP11150 499 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
BRAT1-203ENST00000467558 SIGLEC14Q08ET2 396 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 PWWP2BQ6NUJ5 590 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 ERVMER34-1Q9H9K5 563 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 A0A0G2JMZ2 1700 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 IGHV3-9P01782 118 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 GALNSP34059 522 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 MECP2P51608 486 aaKnown RBP12.49□□□□□ -0.41
BRAT1-203ENST00000467558 AKR1D1P51857 326 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 SLC25A1P53007 311 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 EXOSC3Q9NQT5 275 aaKnown RBP12.49□□□□□ -0.41
BRAT1-203ENST00000467558 TIMM10BQ9Y5J6 103 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 RALGAPA2Q2PPJ7 1873 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 GABARAPH6UMI1 98 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 TSPAN4O14817 238 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 HOXD12P35452 270 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 SEMA6DQ8NFY4 1073 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 INTS12Q96CB8 462 aaKnown RBP12.49□□□□□ -0.41
BRAT1-203ENST00000467558 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 PIGLQ9Y2B2 252 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 SPTA1P02549 2419 aa12.49□□□□□ -0.41
BRAT1-203ENST00000467558 HTR2BP41595 481 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SRSF5Q13243 272 aaKnown RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 CELF2-AS1Q8N7Q2 184 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SLC5A6Q9Y289 635 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PCM1Q15154 2024 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SBF1O95248 1867 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 IFITM5A6NNB3 132 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 E9PI62 339 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 TPOP07202 933 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 EVX1P49640 407 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 OXA1LQ15070 435 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 HEPHL1Q6MZM0 1159 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PRSS42Q7Z5A4 293 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 RDH10Q8IZV5 341 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 OR51E1Q8TCB6 317 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PIGTQ969N2 578 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SARGQ9BW04 601 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 HTR2AP28223 471 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 RPL19P84098 196 aaKnown RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 RBM39Q14498 530 aaKnown RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 TOMM34Q15785 309 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms