RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 UNC119BA6NIH7 251 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 TACSTD2P09758 323 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 MAGEB1P43366 347 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 KLF3P57682 345 aaPredicted RBP18.62■□□□□ 0.57
LIME1-203ENST00000465591 SPIBQ01892 262 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 GLO1Q04760 184 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 KRT72Q14CN4 511 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 NKPD1Q17RQ9 610 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 SPATA46Q5T0L3 261 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 C16orf89Q6UX73 402 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 PTCHD4Q6ZW05 846 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 RFPL4BQ6ZWI9 263 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 ZNF540Q8NDQ6 660 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 OR1J1Q8NGS3 322 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 C11orf40Q8WZ69 217 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 YIPF5Q969M3 257 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 SYT4Q9H2B2 425 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 AURKCQ9UQB9 309 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 TIMM10BQ9Y5J6 103 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 IER3IP1Q9Y5U9 82 aa18.62■□□□□ 0.57
LIME1-203ENST00000465591 SOCS2O14508 198 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 XKRYO14609 159 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 GADD45GO95257 159 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 ITGA2P17301 1181 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 SDHAP31040 664 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 MPV17P39210 176 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 GDI2P50395 445 aaKnown RBP18.61■□□□□ 0.57
LIME1-203ENST00000465591 MXRA7P84157 204 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 DBPQ10586 325 aaPredicted RBP18.61■□□□□ 0.57
LIME1-203ENST00000465591 SNX18Q96RF0 628 aa18.61■□□□□ 0.57
LIME1-203ENST00000465591 FBN1P35555 2871 aaKnown RBP18.6■□□□□ 0.57
LIME1-203ENST00000465591 LOC100289279A0A1B0GTE1 492 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 C17orf100A8MU93 164 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 AHCYL1O43865 530 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 LMX1BO60663 402 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 MPZL1O95297 269 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 NGFP01138 241 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 ATP6V1B2P21281 511 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 IGFBP5P24593 272 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 CDKN2AP42771 156 aaKnown RBP18.6■□□□□ 0.57
LIME1-203ENST00000465591 MNAT1P51948 309 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 CHRFAM7AQ494W8 412 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 GPR139Q6DWJ6 353 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 MARS2Q96GW9 593 aaKnown RBP18.6■□□□□ 0.57
LIME1-203ENST00000465591 IL1RAPQ9NPH3 570 aa18.6■□□□□ 0.57
LIME1-203ENST00000465591 HINT3Q9NQE9 182 aaKnown RBP18.6■□□□□ 0.57
LIME1-203ENST00000465591 VSX1Q9NZR4 365 aaPredicted RBP18.6■□□□□ 0.57
LIME1-203ENST00000465591 C12orf71A8MTZ7 269 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 SLC16A7O60669 478 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 PPP1R3DO95685 299 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 TXNDC12O95881 172 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 FABP3P05413 133 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 RRM2P31350 389 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 GUCA1AP43080 201 aaPredicted RBP18.59■□□□□ 0.57
LIME1-203ENST00000465591 PCBD1P61457 104 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 CYP2R1Q6VVX0 501 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 DPY19L2P2Q6ZN68 376 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 SLC25A40Q8TBP6 338 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 IPCEF1Q8WWN9 437 aaPredicted RBP18.59■□□□□ 0.57
LIME1-203ENST00000465591 RDH5Q92781 318 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 TSSK2Q96PF2 358 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 NDEL1Q9GZM8 345 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 RERGLQ9H628 205 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 CHODLQ9H9P2 273 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 TMEM160Q9NX00 188 aa18.59■□□□□ 0.57
LIME1-203ENST00000465591 COA3Q9Y2R0 106 aaPredicted RBP18.59■□□□□ 0.57
LIME1-203ENST00000465591 B2RBV5 119 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 DCTN6O00399 190 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 WNT9BO14905 357 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 RP2O75695 350 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 GPANK1O95872 356 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 IGHV3-13P01766 116 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 CHN2P52757 468 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 SMIM11AP58511 58 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 SELENOVP59797 346 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 CCL8P80075 99 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 SMARCD3Q6STE5 483 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 SYT9Q86SS6 491 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 ZDHHC21Q8IVQ6 265 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 ALDH16A1Q8IZ83 802 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 ABHD4Q8TB40 342 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 FANK1Q8TC84 345 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 MCUR1Q96AQ8 359 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 OR2J1Q9GZK6 312 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 NUAK2Q9H093 628 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 OR52D1Q9H346 318 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 ZNF275Q9NSD4 429 aaPredicted RBP18.58■□□□□ 0.56
LIME1-203ENST00000465591 NDE1Q9NXR1 346 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 SLCO1C1Q9NYB5 712 aa18.58■□□□□ 0.56
LIME1-203ENST00000465591 OR10H3O60404 316 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 ICMTO60725 284 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 KHDRBS3O75525 346 aaKnown RBP18.57■□□□□ 0.56
LIME1-203ENST00000465591 T-ENOLP0DO92 83 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 ACHEP22303 614 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 FPR3P25089 353 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 CCNIQ14094 377 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 SPATS1Q496A3 300 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 FAM166AQ6J272 317 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 RINLQ6ZS11 566 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 IL17RELQ6ZVW7 336 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms