RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PXKQ7Z7A4 578 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 OR2M7Q8NG81 312 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 LINC01560Q8TB33 94 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 POC1BQ8TC44 478 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 SNX33Q8WV41 574 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 ZMYND19Q96E35 227 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 Q96MF0 132 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 NXF2Q9GZY0 626 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 MARCH7Q9H992 704 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 SPRR3Q9UBC9 169 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 CRNNQ9UBG3 495 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 DKKL1Q9UK85 242 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF346Q9UL40 294 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 TRAPPC4Q9Y296 219 aa12.26□□□□□ -0.45
HDAC6-215ENST00000465457 SF3B6Q9Y3B4 125 aaKnown RBP12.26□□□□□ -0.45
HDAC6-215ENST00000465457 A0A075B6Q4 140 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 A0A1W2PQL4 384 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 FAM171A2A8MVW0 826 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 ARHGEF9O43307 516 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 SERPINI2O75830 405 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 GLSO94925 669 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 IGHG3P01860 377 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 GYPBP06028 91 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 CCL3P10147 92 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 NR2C1P13056 603 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 DPP4P27487 766 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 S100A5P33763 92 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 GBX2P52951 348 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 RPS3AP61247 264 aaKnown RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 SLC35A1P78382 337 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF85Q03923 595 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 RUNX1T1Q06455 604 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 LINC01590Q5TEZ4 76 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 SHEQ5VZ18 495 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 PLEKHG7Q6ZR37 379 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 TRILQ7L0X0 811 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 ZBTB46Q86UZ6 589 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 KLBQ86Z14 1044 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 MS4A15Q8N5U1 240 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 TMEM251Q8N6I4 163 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 OR6Q1Q8NGQ2 317 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 PIGQQ9BRB3 760 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 BEX4Q9NWD9 120 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 FBXL2Q9UKC9 423 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 MRPS18CQ9Y3D5 142 aaKnown RBP12.25□□□□□ -0.45
HDAC6-215ENST00000465457 PEX16Q9Y5Y5 336 aa12.25□□□□□ -0.45
HDAC6-215ENST00000465457 ARPC4-TTLL3A0A0A6YYG9 625 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 LOC102725191A0A1B0GVB3 256 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 B4DXG7 233 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 C11orf98E9PRG8 122 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 DNPH1O43598 174 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 PLPP2O43688 288 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 DSCAMO60469 2012 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 RGS9O75916 674 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-215ENST00000465457 PMS2P2O95744 297 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 SERPINA3P01011 423 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 TFP02787 698 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 TACSTD2P09758 323 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 CELP19835 753 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 SRD5A2P31213 254 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 RORCP51449 518 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 RPS25P62851 125 aaKnown RBP12.24□□□□□ -0.45
HDAC6-215ENST00000465457 DOC2BQ14184 412 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 B3GLCTQ6Y288 498 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 FAM220AQ7Z4H9 259 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 AP3S1Q92572 193 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 MED12Q93074 2177 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 RNASE6Q93091 150 aaKnown RBP12.24□□□□□ -0.45
HDAC6-215ENST00000465457 C4orf36Q96KX1 117 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 KLHL15Q96M94 604 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 INTS14Q96SY0 518 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 TBX5Q99593 518 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 TIMP4Q99727 224 aa12.24□□□□□ -0.45
HDAC6-215ENST00000465457 PNMA8CA0A1B0GUJ8 204 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 OR14I1A6ND48 311 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 RNF212BA8MTL3 300 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 H3BML4 177 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 LINC01387J3KSC0 135 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 J3QLW9 94 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 ACOT7O00154 380 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 GPRIN2O60269 458 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 EIF1BO60739 113 aaKnown RBP12.23□□□□□ -0.45
HDAC6-215ENST00000465457 SULT1C4O75897 302 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 HRGP04196 525 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 IMPDH2P12268 514 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 ZNF19P17023 458 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 CFL1P23528 166 aaKnown RBP12.23□□□□□ -0.45
HDAC6-215ENST00000465457 CD79BP40259 229 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-215ENST00000465457 TGM4P49221 684 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 ENTPD1P49961 510 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 ASCL1P50553 236 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 CSNK2A1P68400 391 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-215ENST00000465457 EGR3Q06889 387 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 RIPPLY2Q5TAB7 128 aa12.23□□□□□ -0.45
HDAC6-215ENST00000465457 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms