RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TNFAIP8L1Q8WVP5 186 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 TMPRSS13Q9BYE2 586 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 EXO5Q9H790 373 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 HHLA2Q9UM44 414 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 NPIPA1Q9UND3 350 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 R4GMQ9 66 aa16.45■□□□□ 0.22
SYNE4-204ENST00000465425 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 A6NIZ1 184 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 CXCL2P19875 107 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 FSTP19883 344 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 ENPP1P22413 925 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 MAP2K6P52564 334 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 RAP1BP61224 184 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 RAP1AP62834 184 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 RNF4P78317 190 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 TDGQ13569 410 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 BPHLQ86WA6 291 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-204ENST00000465425 OR5M1Q8NGP8 315 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 DVL3Q92997 716 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-204ENST00000465425 SFXN2Q96NB2 322 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 GAL3ST1Q99999 423 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 PCED1AQ9H1Q7 454 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 COL5A1P20908 1838 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-204ENST00000465425 A0A1W2PPL8 197 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 SHOXO15266 292 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 GLB1P16278 677 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 IL11P20809 199 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 COL19A1Q14993 1142 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 C4orf46Q504U0 113 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 C11orf88Q6PI97 169 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 C3P1Q6ZMU1 363 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 DCXRQ7Z4W1 244 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 JAGN1Q8N5M9 183 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 CLEC1AQ8NC01 280 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 OR6M1Q8NGM8 313 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 PRMT8Q9NR22 394 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-204ENST00000465425 SPAG17Q6Q759 2223 aa16.44■□□□□ 0.22
SYNE4-204ENST00000465425 A0A1W2PPC1 479 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 MEGF11A6BM72 1044 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 C2orf72A6NCS6 295 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 ZSCAN5BA6NJL1 495 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 LPLP06858 475 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 IGFBP4P22692 258 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 DAP3P51398 398 aaKnown RBP16.43■□□□□ 0.22
SYNE4-204ENST00000465425 TAS2R19P59542 299 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 OC90Q02509 493 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-204ENST00000465425 MFSD13AQ14CX5 517 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 OR7A5Q15622 319 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 CSRP2Q16527 193 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 GPX8Q8TED1 209 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 THAP3Q8WTV1 239 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-204ENST00000465425 ZNF501Q96CX3 271 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-204ENST00000465425 POTEKPQ9BYX7 375 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 UPB1Q9UBR1 384 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 CGGBP1Q9UFW8 167 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-204ENST00000465425 SUSD2Q9UGT4 822 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 OPN4Q9UHM6 478 aa16.43■□□□□ 0.22
SYNE4-204ENST00000465425 MCRIP1C9JLW8 97 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 FTCDNL1E5RQL4 147 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 GOSR2O14653 212 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SIX6O95475 246 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 FOXL2P58012 376 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 FMODQ06828 376 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SIGIRRQ6IA17 410 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 C16orf47Q6ZP98 133 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 GABRG1Q8N1C3 465 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 MUC20Q8N307 709 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 PLPP5Q8NEB5 264 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 OR2AK2Q8NG84 335 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 PMEPA1Q969W9 287 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SLC25A28Q96A46 364 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 PNPLA2Q96AD5 504 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 CMKLR1Q99788 373 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 APMAPQ9HDC9 416 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 OR52A1Q9UKL2 312 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 TMEM269A0A1B0GVZ9 245 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 LOC107986453A0A1B0GWG9 222 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 F5H5P2 479 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SULT1C2O00338 296 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 DOK2O60496 412 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 RRASP10301 218 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 MYF5P13349 255 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 IGFBP3P17936 291 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 H2BFSP57053 126 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 FBXW4P57775 412 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 UBE2MP61081 183 aaKnown RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SEC61A1P61619 476 aaKnown RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SPOCK1Q08629 439 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 C17orf67Q0P5P2 114 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ZNF704Q6ZNC4 412 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ADGRE4PQ86SQ3 457 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 KMT5CQ86Y97 462 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 LINC00346Q8IVM7 164 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 SLC26A10Q8NG04 563 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 LRRC20Q8TCA0 184 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ASB10Q8WXI3 467 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms