RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ZNF709Q8N972 641 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 OR56B2PQ8NGI1 322 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 RAB3IL1Q8TBN0 382 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF681Q96N22 645 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 RSPO3Q9BXY4 272 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-210ENST00000464313 SYNDIG1Q9H7V2 258 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 WFDC1Q9HC57 220 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 ZDHHC4Q9NPG8 344 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF355PQ9NSJ1 428 aa2.31□□□□□ -2.04
PTPN12-210ENST00000464313 GPATCH8Q9UKJ3 1502 aaKnown RBP2.31□□□□□ -2.04
PTPN12-210ENST00000464313 CABIN1Q9Y6J0 2220 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 A0A1W2PQ67 120 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 COLCA2A8K830 154 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 AIM2O14862 343 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 RAD51BO15315 384 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 EIF3HO15372 352 aaKnown RBP eCLIP2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CLOCKO15516 846 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 FOXH1O75593 365 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CIB2O75838 187 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 PABPC4LP0CB38 370 aaKnown RBP2.3□□□□□ -2.04
PTPN12-210ENST00000464313 UBTFL6P0CB48 400 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF24P17028 368 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 NPY1RP25929 384 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 DCKP27707 260 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CEACAM3P40198 252 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 PRMT2P55345 433 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 RCAN2Q14206 197 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CHRNA6Q15825 494 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF726P1Q15940 193 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 SNRNP35Q16560 246 aaKnown RBP2.3□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF684Q5T5D7 378 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CCDC183Q5T5S1 534 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 PRMT9Q6P2P2 845 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 TMEM205Q6UW68 189 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 PRELID2Q8N945 189 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 NOXO1Q8NFA2 376 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 RNF139Q8WU17 664 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 ELMO1Q92556 727 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 RASD2Q96D21 266 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 CNDP1Q96KN2 507 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 SAV1Q9H4B6 383 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-210ENST00000464313 TMED5Q9Y3A6 229 aa2.3□□□□□ -2.04
PTPN12-210ENST00000464313 SGK1O00141 431 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 LSM1O15116 133 aaKnown RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 NUPL2O15504 423 aaKnown RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 RBFOX2O43251 390 aaKnown RBP eCLIP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 CISD3P0C7P0 127 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 MUC1P15941 1255 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 PSMC3P17980 439 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 RAB3BP20337 219 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 GPX4P36969 197 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 CSNK1EP49674 416 aaKnown RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ARG2P78540 354 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ADARB1P78563 741 aaKnown RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 TGM3Q08188 693 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 LOXL1Q08397 574 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 FAM78AQ5JUQ0 283 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 FBXW9Q5XUX1 488 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 PRSS58Q8IYP2 241 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 LGI3Q8N145 548 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF615Q8N8J6 731 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 OR7G2Q8NG99 324 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ACMSDQ8TDX5 336 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 SPIN2AQ99865 258 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 SPIN2BQ9BPZ2 258 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 UBE2ZQ9H832 354 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 SAMSN1Q9NSI8 373 aaKnown RBP2.29□□□□□ -2.04
PTPN12-210ENST00000464313 HRASLS2Q9NWW9 162 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
PTPN12-210ENST00000464313 KIF26AQ9ULI4 1882 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-210ENST00000464313 MAPK8IP3Q9UPT6 1336 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 TMEM223A0PJW6 202 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 L7N2F9 121 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 RDH16O75452 317 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 VAMP5O95183 116 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 TROVE2P10155 538 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTPN12-210ENST00000464313 TCN2P20062 427 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 SELENBP1Q13228 472 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 SRSF5Q13243 272 aaKnown RBP2.28□□□□□ -2.04
PTPN12-210ENST00000464313 SMUG1Q53HV7 270 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 ARMC12Q5T9G4 340 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 C9orf135Q5VTT2 229 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 METTL21CQ5VZV1 264 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 MBOAT1Q6ZNC8 495 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 GTPBP8Q8N3Z3 284 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-210ENST00000464313 OR2A1Q8NGT9 310 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF461Q8TAF7 563 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 LRRC29Q8WV35 223 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 CAPSLQ8WWF8 208 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 ESR2Q92731 530 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 ZNF382Q96SR6 550 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 CCDC77Q9BR77 488 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 PARP12Q9H0J9 701 aaKnown RBP2.28□□□□□ -2.04
PTPN12-210ENST00000464313 SPNS1Q9H2V7 528 aa2.28□□□□□ -2.04
PTPN12-210ENST00000464313 TMEM9BQ9NQ34 198 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms