RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ENDOGQ14249 297 aaKnown RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 HFEQ30201 348 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ACSM5Q6NUN0 579 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 C8orf82Q6P1X6 216 aaPredicted RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ARL9Q6T311 187 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 HACD2Q6Y1H2 254 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF730Q6ZMV8 503 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 USP51Q70EK9 711 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 CLDN22Q8N7P3 220 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC25A40Q8TBP6 338 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 IPCEF1Q8WWN9 437 aaPredicted RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 RAB39BQ96DA2 213 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 TIMD4Q96H15 378 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 NDEL1Q9GZM8 345 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 EFCAB1Q9HAE3 211 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ELOVL3Q9HB03 270 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 TUBG2Q9NRH3 451 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF446Q9NWS9 450 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 RHCGQ9UBD6 479 aa12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 NDRG4Q9ULP0 352 aaKnown RBP12.22□□□□□ -0.45
SNRNP40-203ENST00000463988 NME4O00746 187 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 TPD52L2O43399 206 aaKnown RBP12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 CD14P08571 375 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ITGA2P17301 1181 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 MPV17P39210 176 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ARHGDIAP52565 204 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC7A2P52569 658 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 PPP1CBP62140 327 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 GLO1Q04760 184 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC3A1Q07837 685 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 TSTQ16762 297 aaKnown RBP12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ZBED5Q49AG3 693 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ZMAT1Q5H9K5 638 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 FKBP9P1Q75LS8 142 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 CYP4Z1Q86W10 505 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ABHD4Q8TB40 342 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ZFAND2BQ8WV99 257 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 RAB1CQ92928 201 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 OR2J1Q9GZK6 312 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 LPAR2Q9HBW0 351 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 POLE4Q9NR33 117 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 GRHPRQ9UBQ7 328 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 KLHL21Q9UJP4 597 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 ZDHHC8Q9ULC8 765 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 WIPI2Q9Y4P8 454 aa12.21□□□□□ -0.45
SNRNP40-203ENST00000463988 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.46
SNRNP40-203ENST00000463988 A0A1W2PPL8 197 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 XKRYO14609 159 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 SPRY3O43610 288 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 PNPP00491 289 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 SERPINA1P01009 418 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 NGFP01138 241 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 CD55P08174 381 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 RPL4P36578 427 aaKnown RBP12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 GSK3BP49841 420 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 MVKQ03426 396 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 HSP90B2PQ58FF3 399 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 AVPI1Q5T686 147 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 SHQ1Q6PI26 577 aaKnown RBP12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 RRM2BQ7LG56 351 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 ZER1Q7Z7L7 766 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 G6PC2Q9NQR9 355 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 TBCCD1Q9NVR7 557 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 ENPP4Q9Y6X5 453 aa12.2□□□□□ -0.46
SNRNP40-203ENST00000463988 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 A0A1W2PRQ8 180 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 PRSS37A4D1T9 235 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 J3QLI3 93 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 CDC42EP2O14613 210 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 PLPP2O43688 288 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 UBOX5O94941 541 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 MPZL1O95297 269 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 GPR4P46093 362 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 SCRN3Q0VDG4 424 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 DGCR6Q14129 220 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 GPR139Q6DWJ6 353 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms