RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 DNAJC13O75165 2243 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 ANK2Q01484 3957 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 IGHV3-15A0A0B4J1V0 119 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 A0A0J9YW62 118 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SH3PXD2BA1X283 911 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 EI24O14681 340 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 TP53I11O14683 189 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 IMPA2O14732 288 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 CLOCKO15516 846 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 EIF4E2O60573 245 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 NPIPB7O75200 414 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 P04436 131 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 H1F0P07305 194 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 UMPSP11172 480 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 POU2F1P14859 743 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 HPGDP15428 266 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 EDNRAP25101 427 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 DPP4P27487 766 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 LCN1P31025 176 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OMPP47874 163 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 TMED10P49755 219 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 DAPP51397 102 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 TAS2R41P59536 307 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 RUNX1T1Q06455 604 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SNTA1Q13424 505 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 CBFBQ13951 182 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 GNA13Q14344 377 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 GK3PQ14409 553 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 FAM98BQ52LJ0 330 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SLC25A53Q5H9E4 307 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OGFRL1Q5TC84 451 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 PGBD2Q6P3X8 592 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 AAGABQ6PD74 315 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 GALNT5Q7Z7M9 940 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 NRMQ8IXM6 262 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 C10orf67Q8IYJ2 551 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 CBR4Q8N4T8 237 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 LSMEM1Q8N8F7 131 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR4K5Q8NGD3 323 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR8D4Q8NGM9 314 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR1J4Q8NGS1 313 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR13C2Q8NGS9 318 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 PMM1Q92871 262 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 NEUROG1Q92886 237 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SGCZQ96LD1 299 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF597Q96LX8 424 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 MBOAT4Q96T53 435 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 FAM173AQ9BQD7 235 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 UGT2B28Q9BY64 529 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SRXN1Q9BYN0 137 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 HOXD1Q9GZZ0 328 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 RBM38Q9H0Z9 239 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 ALKBH4Q9NXW9 302 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 CNIH4Q9P003 139 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 STX18Q9P2W9 335 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 DNAJB9Q9UBS3 223 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 AASSQ9UDR5 926 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 IL20RAQ9UHF4 553 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 MRTO4Q9UKD2 239 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SLC35A3Q9Y2D2 325 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF337Q9Y3M9 751 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 SAMHD1Q9Y3Z3 626 aaKnown RBP3.16□□□□□ -1.9
SCFD1-204ENST00000463622 PCDHGB5Q9Y5G0 923 aa3.16□□□□□ -1.9
SCFD1-204ENST00000463622 NINQ8N4C6 2090 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF407Q9C0G0 2248 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TRAV27A0A087WT01 109 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 A0A087WUJ7 227 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TMED7-TICAM2A0A0A6YYA0 188 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TRGV5A0A0B4J1U4 118 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TRAPPC13A5PLN9 417 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 CXorf65A6NEN9 183 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 DEFB108AA8MXU0 73 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 FTCDNL1E5RQL4 147 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 E9PQ18 207 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 H0YHG0 523 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TNFRSF11BO00300 401 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 FAAHO00519 579 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 CASQ2O14958 399 aaPredicted RBP3.15□□□□□ -1.9
SCFD1-204ENST00000463622 CHP2O43745 196 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 CD5LO43866 347 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TMCC2O75069 709 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 GMNNO75496 209 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 TRAPPC6AO75865 159 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 OR5F1O95221 314 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 GADD45GO95257 159 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 SOX14O95416 240 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 CLIC3O95833 236 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 NUDT14O95848 222 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 HPRP00739 348 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 IFNA14P01570 189 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 BGLAPP02818 100 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 HPNP05981 417 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 FAM157CP0CG43 387 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF23P17027 643 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 FASP25445 335 aa3.15□□□□□ -1.9
SCFD1-204ENST00000463622 GDF1P27539 372 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms