RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SPIBQ01892 262 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ROR2Q01974 943 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 TGFBR3Q03167 851 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 PCK2Q16822 640 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 RFX4Q33E94 735 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MESTQ5EB52 335 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 FGD3Q5JSP0 725 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 NCMAPQ5T1S8 102 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 KDM4DQ6B0I6 523 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 HIST2H2BCQ6DN03 193 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ZFP1Q6P2D0 407 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 NIPAL3Q6P499 406 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ANKRD16Q6P6B7 361 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 SMARCD3Q6STE5 483 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 CASP12Q6UXS9 341 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 ABHD12BQ7Z5M8 362 aaPredicted RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 ADCK1Q86TW2 530 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 GPAT4Q86UL3 456 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ZBTB46Q86UZ6 589 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 CCDC36Q8IYA8 594 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ZNF100Q8IYN0 542 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 NPEPL1Q8NDH3 523 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 OR8D4Q8NGM9 314 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 OR52J3Q8NH60 311 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 LILRB1Q8NHL6 650 aaPredicted RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 GNPDA2Q8TDQ7 276 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MCHR2Q969V1 340 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ZNF566Q969W8 418 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ALKBH3Q96Q83 286 aaPredicted RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 TSPAN32Q96QS1 320 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 WACQ9BTA9 647 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 EMC6Q9BV81 110 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 KATNB1Q9BVA0 655 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 PLA2G12AQ9BZM1 189 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ACTR6Q9GZN1 396 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 OR52D1Q9H346 318 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 YY1AP1Q9H869 796 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 REEP1Q9H902 201 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 CRLF2Q9HC73 371 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MOV10Q9HCE1 1003 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 GLTPQ9NZD2 209 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MGAT4BQ9UQ53 548 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ADAM18Q9Y3Q7 739 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 SAMHD1Q9Y3Z3 626 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 AP4S1Q9Y587 144 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 F8P00451 2351 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 IGLV1-36A0A0B4J1U3 117 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 A0A1W2PRG6 482 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 SLC22A23A1A5C7 686 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 PRSS37A4D1T9 235 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 UNC119BA6NIH7 251 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 A6NIZ1 184 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 SHISA9B4DS77 424 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 BLOC1S5-TXNDC5H3BN57 136 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 DHHO43323 396 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 RNF13O43567 381 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 OR10H3O60404 316 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 TMCC2O75069 709 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 LYZL6O75951 148 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CCNB2O95067 398 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 BCL10O95999 233 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 IGHV3-9P01782 118 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST1H2ABP04908 130 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 GAAP10253 952 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 SAGP10523 405 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 FCGR1AP12314 374 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 NR2C1P13056 603 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 ANXA8P13928 327 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 COX6B1P14854 86 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 ZNF14P17017 642 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 GSTM3P21266 225 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CDKN2AP42771 156 aaKnown RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 CSNK1A1P48729 337 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CTXN1P60606 82 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 RAP1BP61224 184 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 RAP1AP62834 184 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST1H3AP68431 136 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 ADAM8P78325 824 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CDK5Q00535 292 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 TLE4Q04727 773 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 FAPQ12884 760 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CAMK2DQ13557 499 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 KPNB1Q14974 876 aaKnown RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 CEACAM16Q2WEN9 425 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 KRTAP27-1Q3LI81 207 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 TBRG1Q3YBR2 411 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 BEX5Q5H9J7 111 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 THEM4Q5T1C6 240 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST2H3PS2Q5TEC6 136 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 FAM27BQ5VT28 67 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 C1orf146Q5VVC0 180 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 KLHL17Q6TDP4 642 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST2H3AQ71DI3 136 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST3H2AQ7L7L0 130 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms