RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 AKR1C2P52895 323 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 UBE2IP63279 158 aaKnown RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 IGLV3-21P80748 117 aaPredicted RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 AKR1C1Q04828 323 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 SRSF4Q08170 494 aaKnown RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 FUT7Q11130 342 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 HSPB2Q16082 182 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 C1QL3Q5VWW1 255 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 ZNF563Q8TA94 476 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 ZBTB8AQ96BR9 441 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 RPP25Q9BUL9 199 aaKnown RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 FAM117AQ9C073 453 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 MYOZ1Q9NP98 299 aaPredicted RBP16.61■□□□□ 0.25
HPS3-204ENST00000462030 PCDHB10Q9UN67 800 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 F5P12259 2224 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 KIF26BQ2KJY2 2108 aa16.61■□□□□ 0.25
HPS3-204ENST00000462030 A0A1W2PQF6 199 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 FITM1A5D6W6 292 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 NTSR1P30989 418 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 PMPCAQ10713 525 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 TOMM20Q15388 145 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 SHEQ5VZ18 495 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 C3orf33Q6P1S2 294 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 CORO6Q6QEF8 472 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 CD163Q86VB7 1156 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 ZNF679Q8IYX0 411 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 RNF128Q8TEB7 428 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 SLC37A2Q8TED4 501 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
HPS3-204ENST00000462030 CMKLR1Q99788 373 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 LRP4O75096 1905 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 TTLL8A6PVC2 850 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 KCNAB3O43448 404 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 SIGLEC6O43699 453 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 ATG12O94817 140 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 CD74P04233 296 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 BDKRB2P30411 391 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 PAN3Q58A45 887 aaKnown RBP16.6■□□□□ 0.25
HPS3-204ENST00000462030 TEX30Q5JUR7 227 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 TMEM88Q6PEY1 159 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 TAF8Q7Z7C8 310 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 OR5T2Q8NGG2 359 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 THRSPQ92748 146 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 RELTQ969Z4 430 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 SCPEP1Q9HB40 452 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 PRMT8Q9NR22 394 aaPredicted RBP16.6■□□□□ 0.25
HPS3-204ENST00000462030 UBQLN4Q9NRR5 601 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 MRPL22Q9NWU5 206 aaKnown RBP16.6■□□□□ 0.25
HPS3-204ENST00000462030 SLC39A1Q9NY26 324 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 B9D1Q9UPM9 204 aa16.6■□□□□ 0.25
HPS3-204ENST00000462030 FAM25EA8MYX2 175 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 SULT2B1O00204 365 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ZNF264O43296 627 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 WISP1O95388 367 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 CD96P40200 585 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 CASRP41180 1078 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 SQSTM1Q13501 440 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ZNF542PQ5EBM4 170 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 LPCAT3Q6P1A2 487 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ACOT7LQ6ZUV0 252 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PARGQ86W56 976 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ZNF321PQ8N8H1 164 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ADAT1Q9BUB4 502 aaKnown RBP16.59■□□□□ 0.25
HPS3-204ENST00000462030 RTN4RQ9BZR6 473 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ASF1BQ9NVP2 202 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 HOXB2P14652 356 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 SPOCK1Q08629 439 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PPP1R1AQ13522 171 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PRAMEF17Q5VTA0 474 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PAPD4Q6PIY7 484 aaKnown RBP16.59■□□□□ 0.25
HPS3-204ENST00000462030 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 ADGRE4PQ86SQ3 457 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PUSL1Q8N0Z8 303 aaKnown RBP16.59■□□□□ 0.25
HPS3-204ENST00000462030 SLC25A44Q96H78 314 aaPredicted RBP16.59■□□□□ 0.25
HPS3-204ENST00000462030 CST11Q9H112 138 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 PIGMQ9H3S5 423 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
HPS3-204ENST00000462030 MRPS33Q9Y291 106 aaKnown RBP16.59■□□□□ 0.25
HPS3-204ENST00000462030 KNL1Q8NG31 2342 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 DISC1C4P0D8 188 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 C5orf67F2Z3F1 127 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 SCDO00767 359 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 XKRYO14609 159 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 FREM3P0C091 2139 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 IGFBP3P17936 291 aaPredicted RBP16.58■□□□□ 0.25
HPS3-204ENST00000462030 ZBTB25P24278 435 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 UNQ6126/PRO20091Q6UXV3 157 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 RHOUQ7L0Q8 258 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 OOSP2Q86WS3 158 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 FAM160A2Q8N612 972 aaPredicted RBP16.58■□□□□ 0.25
HPS3-204ENST00000462030 ACBD4Q8NC06 268 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 NKD1Q969G9 470 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 MRGPRFQ96AM1 343 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 PHYHIPLQ96FC7 376 aa16.58■□□□□ 0.25
HPS3-204ENST00000462030 TSNAXQ99598 290 aaKnown RBP16.58■□□□□ 0.25
HPS3-204ENST00000462030 CKLFQ9UBR5 152 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms