RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HBE1P02100 147 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 ARG1P05089 322 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 PCCAP05165 728 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 FOLR1P15328 257 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 BCKDHBP21953 392 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 HOXA9P31269 272 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 GPX4P36969 197 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 LHX2P50458 406 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 NCBP2P52298 156 aaKnown RBP eCLIP2□□□□□ -2.09
HDAC6-212ENST00000461608 VSX2P58304 361 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 EIF3EP60228 445 aaKnown RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 KRTAP10-8P60410 259 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 IRX3P78415 501 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 ERCC8Q13216 396 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 GINS1Q14691 196 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF726P1Q15940 193 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 MRPL23Q16540 153 aaKnown RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 ALKBH6Q3KRA9 238 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 CHRFAM7AQ494W8 412 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 HES5Q5TA89 166 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF530Q6P9A1 599 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 TMCO2Q7Z6W1 182 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 PCP2Q8IVA1 136 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 STPG2Q8N412 459 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 PRELID2Q8N945 189 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 HSD17B11Q8NBQ5 300 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 DUSP18Q8NEJ0 188 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 NOXO1Q8NFA2 376 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 OR9G4Q8NGQ1 327 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 OR10J6PQ8NGY7 276 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 OR5B3Q8NH48 314 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 AGR3Q8TD06 166 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 GPX8Q8TED1 209 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 GIMAP1Q8WWP7 306 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 TMEM230Q96A57 120 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 RNF185Q96GF1 192 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 OPALINQ96PE5 141 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 HDHD3Q9BSH5 251 aaPredicted RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 IFI27L2Q9H2X8 130 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 CDC42EP4Q9H3Q1 356 aaKnown RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 RPP21Q9H633 154 aaKnown RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 KCNJ16Q9NPI9 418 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 LHX9Q9NQ69 397 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 ABCB10Q9NRK6 738 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 UVRAGQ9P2Y5 699 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 TBC1D24Q9ULP9 559 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 F11RQ9Y624 299 aaKnown RBP2□□□□□ -2.09
HDAC6-212ENST00000461608 WSB1Q9Y6I7 421 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 MEGF6O75095 1541 aa2□□□□□ -2.09
HDAC6-212ENST00000461608 GOLGA6L7A0A1B0GV03 622 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 NCF1BA6NI72 391 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 NCF1CA8MVU1 366 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 KMOO15229 486 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 NUPL2O15504 423 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 HLA-DPB1P04440 258 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 FABP3P05413 133 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 GSTM3P21266 225 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 LONP1P36776 959 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 CDKN1BP46527 198 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 RAD51Q06609 339 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 CDH17Q12864 832 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 WDR43Q15061 677 aaKnown RBP eCLIP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 IRF4Q15306 451 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 POU2AF1Q16633 256 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 TSPO2Q5TGU0 170 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 PLCXD3Q63HM9 321 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 PRSS58Q8IYP2 241 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 CMTM1Q8IZ96 169 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF433Q8N7K0 673 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 C8orf31Q8N9H6 132 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 MARCH1Q8TCQ1 289 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 SRSF12Q8WXF0 261 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 ISG20Q96AZ6 181 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 DCPSQ96C86 337 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 DUS3LQ96G46 650 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 BMFQ96LC9 184 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 C9orf72Q96LT7 481 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 FOPNLQ96NB1 174 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 WFIKKN1Q96NZ8 548 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 SDHCQ99643 169 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 BPIFA3Q9BQP9 254 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 SLC25A2Q9BXI2 301 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 UCK2Q9BZX2 261 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 IL22Q9GZX6 179 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 PEF1Q9UBV8 284 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 TRMT112Q9UI30 125 aaKnown RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 RAB26Q9ULW5 256 aa1.99□□□□□ -2.09
HDAC6-212ENST00000461608 COL22A1Q8NFW1 1626 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-212ENST00000461608 MAP3K15Q6ZN16 1313 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 WDR19Q8NEZ3 1342 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 IGLV1-50A0A075B6I6 118 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 A0A1B0GTQ1 180 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 SUPT3HB4E1H0 165 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 H0YHG0 523 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 SMKR1H3BMG3 65 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 TRDMT1O14717 391 aaKnown RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 EIF3HO15372 352 aaKnown RBP eCLIP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms