RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 MARCH9Q86YJ5 346 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 SPACA3Q8IXA5 215 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 ZNF100Q8IYN0 542 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 TMEM123Q8N131 208 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 KDM8Q8N371 416 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 ZNF676Q8N7Q3 588 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 MCFD2Q8NI22 146 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 DYNC2LI1Q8TCX1 351 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 C15orf40Q8WUR7 153 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 SNRNP27Q8WVK2 155 aaKnown RBP6.63□□□□□ -1.35
LSG1-205ENST00000461343 RNF133Q8WVZ7 376 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 GHSRQ92847 366 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 WNT2BQ93097 391 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 SLC25A46Q96AG3 418 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 PELI1Q96FA3 418 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 CPNE2Q96FN4 548 aaPredicted RBP6.63□□□□□ -1.35
LSG1-205ENST00000461343 TSSK2Q96PF2 358 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
LSG1-205ENST00000461343 ZNF649Q9BS31 505 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 TMED9Q9BVK6 235 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 CALHM2Q9HA72 323 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 POLE4Q9NR33 117 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 SNTG1Q9NSN8 517 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 TXNL4BQ9NX01 149 aaKnown RBP6.63□□□□□ -1.35
LSG1-205ENST00000461343 UPB1Q9UBR1 384 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 CYB5R1Q9UHQ9 305 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
LSG1-205ENST00000461343 CAMK2AQ9UQM7 478 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 R4GMQ9 66 aa6.63□□□□□ -1.35
LSG1-205ENST00000461343 EML6Q6ZMW3 1958 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TVP23AA6NH52 213 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ZNF716A6NP11 495 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 CLDN25C9JDP6 229 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 LOC110117498-PIK3R3F6TDL0 507 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 RPL36A-HNRNPH2H7BZ11 118 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 MASP2O00187 686 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 GABRPO00591 440 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ISG15P05161 165 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ERCC1P07992 297 aaPredicted RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 CST2P09228 141 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 OR8G3PP0DMU2 310 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 HOXB1P14653 301 aaPredicted RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 PTBP1P26599 531 aaKnown RBP eCLIP6.62□□□□□ -1.35
LSG1-205ENST00000461343 SDC2P34741 201 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TALDO1P37837 337 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ID4P47928 161 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 NCS1P62166 190 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 SRYQ05066 204 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 SLC3A1Q07837 685 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 DCTN2Q13561 401 aaKnown RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 MEP1BQ16820 701 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 SLC36A2Q495M3 483 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 Q499Y3 187 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TP53I3Q53FA7 332 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 HSD17B12Q53GQ0 312 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 BCL2L15Q5TBC7 163 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 DCXRQ7Z4W1 244 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 CEACAM19Q7Z692 300 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 LUZP2Q86TE4 346 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 OR52H1Q8NGJ2 320 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ABHD4Q8TB40 342 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 RPS4Y2Q8TD47 263 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 BORCS5Q969J3 196 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 C10orf35Q96D05 121 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 SLAMF6Q96DU3 332 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TXNDC15Q96J42 360 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TIMP4Q99727 224 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 NPAS1Q99742 590 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ABHD6Q9BV23 337 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 EMC6Q9BV81 110 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 RBM24Q9BX46 236 aaKnown RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 SRXN1Q9BYN0 137 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 OR51E2Q9H255 320 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 SLC6A15Q9H2J7 730 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 RGCCQ9H4X1 137 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ISG20L2Q9H9L3 353 aaKnown RBP6.62□□□□□ -1.35
LSG1-205ENST00000461343 ELOVL3Q9HB03 270 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 PLGRKTQ9HBL7 147 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TCF7L1Q9HCS4 588 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 ACOXLQ9NUZ1 547 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 HHLA2Q9UM44 414 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 WASF3Q9UPY6 502 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TIMM10BQ9Y5J6 103 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 HRH3Q9Y5N1 445 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 MED13Q9UHV7 2174 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 PCNX3Q9H6A9 2034 aa6.62□□□□□ -1.35
LSG1-205ENST00000461343 TMEM269A0A1B0GVZ9 245 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 OR6C6A6NF89 314 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CD8B2A6NJW9 211 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 TTLL8A6PVC2 850 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 DCTN6O00399 190 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 LRRTM2O43300 516 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 SLC19A2O60779 497 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 SS18L1O75177 396 aaPredicted RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 GPX5O75715 221 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 TPPPO94811 219 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ABHD16AO95870 558 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms