RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MEX3AA1L020 520 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 NPIPA2E9PIF3 369 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 NPIPA3F8WFD2 350 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 J3QW42 95 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 OR2T1O43869 369 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 WBP4O75554 376 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 RCBTB2O95199 551 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 CRYABP02511 175 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 HIST1H1CP16403 213 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 TALDO1P37837 337 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 CD79BP40259 229 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 TLE1Q04724 770 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 PIGFQ07326 219 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 SNAPC1Q16533 368 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 SGCBQ16585 318 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 H1FNTQ75WM6 255 aaPredicted RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 SDR9C7Q8NEX9 313 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 OR2T33Q8NG76 320 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 TSPAN32Q96QS1 320 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ASPNQ9BXN1 380 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ACKR4Q9NPB9 350 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 CHST11Q9NPF2 352 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 BRD7Q9NPI1 651 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 SPIN1Q9Y657 262 aaPredicted RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 ZNF716A6NP11 495 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 RPP14O95059 124 aaKnown RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 APOL3O95236 402 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 MT-ATP6P00846 226 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 GYPBP06028 91 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 ZNF735P0CB33 412 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 CBR1P16152 277 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 ZNF12P17014 697 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 ZNF708P17019 499 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 GABRB1P18505 474 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 GIFP27352 417 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 GTF2E2P29084 291 aaKnown RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 SMSP52788 366 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 CDK5R2Q13319 367 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 KEAP1Q14145 624 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 MAD2L1BPQ15013 274 aaPredicted RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 VASNQ6EMK4 673 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 KRT80Q6KB66 452 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 UGT2A3Q6UWM9 527 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 FGD2Q7Z6J4 655 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 ZNF786Q8N393 782 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 LNX2Q8N448 690 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 MARVELD2Q8N4S9 558 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 OR52L1Q8NGH7 329 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 OR52E2Q8NGJ4 325 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 OR51L1Q8NGJ5 315 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 SLC25A43Q8WUT9 341 aaPredicted RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 ZNRF4Q8WWF5 429 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 TSSK2Q96PF2 358 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 NMNAT3Q96T66 252 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 MMP27Q9H306 513 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 TIGARQ9NQ88 270 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 MRPS7Q9Y2R9 242 aaKnown RBP9.18□□□□□ -0.94
USP39-210ENST00000459775 HDGFL3Q9Y3E1 203 aa9.18□□□□□ -0.94
USP39-210ENST00000459775 FAM171A2A8MVW0 826 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SURF4O15260 269 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 ENTPD6O75354 484 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 OR6A2O95222 327 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 TSPAN19P0C672 248 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 DBTP11182 482 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 IFNGR1P15260 489 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SLC6A6P31641 620 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 NTF4P34130 210 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 CDKN2AP42771 156 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 CDH15P55291 814 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 CDC42P60953 191 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 H3F3AP84243 136 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 EFNB1P98172 346 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 POU3F1Q03052 451 aaPredicted RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 PUDPQ08623 228 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 CRMP1Q14194 572 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 ACKR1Q16570 336 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 PLA1AQ53H76 456 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 TMEM225Q6GV28 225 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 CASP12Q6UXS9 341 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 BHLHA15Q7RTS1 189 aaPredicted RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 BPIFB6Q8NFQ5 453 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 OR9Q1Q8NGQ5 310 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 FNDC9Q8TBE3 224 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 ABHD3Q8WU67 409 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SMAP2Q8WU79 429 aaPredicted RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 WDYHV1Q96HA8 205 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 FOXN4Q96NZ1 517 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 POLDIP3Q9BY77 421 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 SLC25A19Q9HC21 320 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 HINT3Q9NQE9 182 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 CENPMQ9NSP4 180 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 DNAJC13O75165 2243 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 NAV2Q8IVL1 2488 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 A0A0B4J293 547 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms