RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PCBD1P61457 104 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 LCN6P62502 163 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 PSG4Q00888 419 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 PRKCDQ05655 676 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM27BQ5VT28 67 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 SLC15A3Q8IY34 581 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF101Q8IZC7 436 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 C3orf56Q8N813 242 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 IPCEF1Q8WWN9 437 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 ACOT11Q8WXI4 607 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 TMEM186Q96B77 213 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 POM121L2Q96KW2 1035 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 OR2H1Q9GZK4 316 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 GRHPRQ9UBQ7 328 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 IGHV1-69-2A0A0G2JMI3 117 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 CLDN25C9JDP6 229 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 NME4O00746 187 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 SPRY3O43610 288 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 SNX3O60493 162 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 IGHV3-13P01766 116 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 CST2P09228 141 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 MSR1P21757 451 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 FUT4P22083 530 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 MPV17P39210 176 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 WNT5AP41221 380 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 HFEQ30201 348 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 ANKDD1AQ495B1 522 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF774Q6NX45 483 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 THSD4Q6ZMP0 1018 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 SEMA6DQ8NFY4 1073 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 ELMOD3Q96FG2 381 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 TIMD4Q96H15 378 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 HOPXQ9BPY8 73 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 OR2J1Q9GZK6 312 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 METTL17Q9H7H0 456 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 MAN2C1Q9NTJ4 1040 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 NKIRAS2Q9NYR9 191 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 TIMM10BQ9Y5J6 103 aa13.42□□□□□ -0.26
CHCHD3-204ENST00000457942 LOC100509620A0A075B734 347 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 C12orf71A8MTZ7 269 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 NCK1P16333 377 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 CRYBB2P43320 205 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 GSK3BP49841 420 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 PPP1CBP62140 327 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ARL9Q6T311 187 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 RFPL4BQ6ZWI9 263 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 MBOAT2Q6ZWT7 520 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 CBLL1Q75N03 491 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 LRRC75AQ8NAA5 344 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 RAB39BQ96DA2 213 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF570Q96NI8 536 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 RACGAP1Q9H0H5 632 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 WNT5BQ9H1J7 359 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 RERGLQ9H628 205 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF665Q9H7R5 613 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ELOVL3Q9HB03 270 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 EMC7Q9NPA0 242 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
CHCHD3-204ENST00000457942 A0A087WUU8 490 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 TRAV20A0A0B4J274 112 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 ISPDA4D126 451 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FFAR1O14842 300 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 TIMM8AO60220 97 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 ABHD16AO95870 558 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 ANPEPP15144 967 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 SCGB2A2Q13296 93 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FGD3Q5JSP0 725 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FAHD2BQ6P2I3 314 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 TBPL2Q6SJ96 375 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 KLF14Q8TD94 323 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 CCL17Q92583 94 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 RAB1CQ92928 201 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 ZMYND19Q96E35 227 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FAHD2AQ96GK7 314 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 MARS2Q96GW9 593 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM46AQ96IP4 442 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 EGLN1Q9GZT9 426 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 POLE4Q9NR33 117 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 CYSLTR2Q9NS75 346 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 TMEM5Q9Y2B1 443 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM32AQ9Y421 112 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 WIPI2Q9Y4P8 454 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 CACNG2Q9Y698 323 aa13.4□□□□□ -0.26
CHCHD3-204ENST00000457942 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 DOK2O60496 412 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 GMNNO75496 209 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 MPZL1O95297 269 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 IGHV1-46P01743 117 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 CD14P08571 375 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms