RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KDM8Q8N371 416 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 MFSD8Q8NHS3 518 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 RADILQ96JH8 1075 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 UTP23Q9BRU9 249 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 OR10A4Q9H209 315 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 METTL17Q9H7H0 456 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 A0A1B0GUH1 482 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 A6NIZ1 184 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 ALOX12BO75342 701 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 MPZL1O95297 269 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 CFDP00746 253 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 PNLIPP16233 465 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 APOBEC1P41238 236 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 CXCL12P48061 93 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 VEGFCP49767 419 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 SELENOPP49908 381 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 MAP2K6P52564 334 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 RIDAP52758 137 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 EFNB2P52799 333 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 RAP1BP61224 184 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 RAP1AP62834 184 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 ACY1Q03154 408 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 GLO1Q04760 184 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 MFSD13AQ14CX5 517 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 PXDC1Q5TGL8 231 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 MAMSTRQ6ZN01 415 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 Q6ZTK2 550 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 NLRC3Q7RTR2 1065 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 BIVMQ86UB2 503 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 FTMTQ8N4E7 242 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 OR51D1Q8NGF3 324 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 ASB10Q8WXI3 467 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 ARL5BQ96KC2 179 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 LRP12Q9Y561 859 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 MAB21L2Q9Y586 359 aa16.48■□□□□ 0.23
SEMA3B-209ENST00000456560 M0R233 179 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 RRASP10301 218 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 CD37P11049 281 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 ARRB1P49407 418 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 TAGLNQ01995 201 aaKnown RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC51BQ86UW2 128 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 WDFY1Q8IWB7 410 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 ZNF248Q8NDW4 579 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 OR52N5Q8NH56 324 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 THAP3Q8WTV1 239 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 WDR77Q9BQA1 342 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 NOX3Q9HBY0 568 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 MED11Q9P086 117 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 CABIN1Q9Y6J0 2220 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 H7C417 338 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC17A2O00624 439 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 ARPC1BO15143 372 aaKnown RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 RAD1O60671 282 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 CTAG2O75638 210 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 ITGA5P08648 1049 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 PCK2Q16822 640 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 LINC00303Q3SY05 128 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 METTL11BQ5VVY1 283 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 H1FNTQ75WM6 255 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC26A10Q8NG04 563 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 NPDC1Q9NQX5 325 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 MTFP1Q9UDX5 166 aa16.47■□□□□ 0.23
SEMA3B-209ENST00000456560 LY6G6EA0A0G2JKS1 128 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 NPIPB13A6NJU9 1138 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 NPIPB4C9JG80 1138 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 ETV2O00321 342 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 ZNF208O43345 1280 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 NAGAP17050 411 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 POU3F4P49335 361 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 MECP2P51608 486 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 OR7A5Q15622 319 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 RAB11BQ15907 218 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 C2orf76Q3KRA6 126 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 ARSKQ6UWY0 536 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 NDUFAF7Q7L592 441 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 GALNT11Q8NCW6 608 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 ASB5Q8WWX0 329 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 OR6C1Q96RD1 312 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 KCNK17Q96T54 332 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 GTF2A1LQ9UNN4 478 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 DHDHQ9UQ10 334 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 HRH3Q9Y5N1 445 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 U3KQA8 63 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 CACNA1CQ13936 2221 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 A0A1W2PQM1 296 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 GGT3PA6NGU5 568 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 CDK2AP1O14519 115 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 NDUFB6O95139 128 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 ALDOBP05062 364 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 IFNGR1P15260 489 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 IGFBP3P17936 291 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 RAD52P43351 418 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 TMEM225Q6GV28 225 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 FAAP20Q6NZ36 180 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 PAPD4Q6PIY7 484 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 GLDNQ6ZMI3 551 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 UBALD2Q8IYN6 164 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC25A28Q96A46 364 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms