RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ARSIQ5FYB1 569 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM69Q5SWH9 247 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM25Q86YD3 366 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 NUDCD2Q8WVJ2 157 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MCHR2Q969V1 340 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB7BQ96AH8 199 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CCDC74AQ96AQ1 378 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RASD2Q96D21 266 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 EPHX3Q9H6B9 360 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 XKR8Q9H6D3 395 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CWH43Q9H720 699 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM27Q9HBJ8 222 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM138Q9NPI0 162 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CGGBP1Q9UFW8 167 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC45A1Q9Y2W3 748 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 EXOSC1Q9Y3B2 195 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 F5H5P2 479 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 H0YL77 283 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TERTO14746 1132 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MED6O75586 246 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CRHP06850 196 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HLA-GP17693 338 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 BMP7P18075 431 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 EDNRAP25101 427 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CRABP1P29762 137 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PBLDP30039 288 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ID2Q02363 134 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SSX2Q16385 188 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 KLHL26Q53HC5 615 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ARL14EPQ8N8R7 260 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2T33Q8NG76 320 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 VWCEQ96DN2 955 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SMIM8Q96KF7 97 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MOGAT1Q96PD6 335 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 BRF2Q9HAW0 419 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 Q9N2J8 555 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PRDM7Q9NQW5 492 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TP73-AS1Q9UF72 201 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MMACHCQ9Y4U1 282 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HCFC1P51610 2035 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 FAM221BA6H8Z2 402 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OTOL1A6NHN0 477 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ADRB3P13945 408 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 DDTP30046 118 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR1G1P47890 313 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 PSEN2P49810 448 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 VASPP50552 380 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ZFP36L1Q07352 338 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SMAD4Q13485 552 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TAF13Q15543 124 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 NKAPLQ5M9Q1 402 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2A1Q8NGT9 310 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF671Q8TAW3 534 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 Q8WTZ3 238 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 MIB2Q96AX9 1013 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR34Q96EX3 536 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 POFUT1Q9H488 388 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 APMAPQ9HDC9 416 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 GPN3Q9UHW5 284 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 GDF2Q9UK05 429 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 C17orf113A0A1B0GUU1 675 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 UTP20O75691 2785 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TRGC2P03986 189 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 PCCBP05166 539 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CT62P0C5K7 136 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CPMP14384 443 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SELPP16109 830 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ASMTP46597 345 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR8G1Q15617 311 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 C4orf17Q53FE4 359 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 HENMT1Q5T8I9 393 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CRIP3Q6Q6R5 217 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SSX9Q7RTT3 188 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 FJX1Q86VR8 437 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 BEST3Q8N1M1 668 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 NAXEQ8NCW5 288 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TFGQ92734 400 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC22A18Q96BI1 424 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 P2RX2Q9UBL9 471 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 KLK13Q9UKR3 277 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 PLEKHA6Q9Y2H5 1048 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 STARD10Q9Y365 291 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 MYO18BQ8IUG5 2567 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 COL4A6Q14031 1691 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 KIAA1549LQ6ZVL6 1849 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 A6NIZ1 184 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ARGFXA6NJG6 315 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF726A6NNF4 738 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 EEF1E1-BLOC1S5C9J1V9 151 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 RNASEK-C17orf49H0YIS7 233 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TBL1XO60907 577 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR1D2P34982 312 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 APOBEC1P41238 236 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ASCL1P50553 236 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CAV2P51636 162 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 GPR143P51810 404 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CDH4P55283 916 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 RAP1BP61224 184 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms